Chlorine in PDB 7p9k: Phage Resistance Protein

Protein crystallography data

The structure of Phage Resistance Protein, PDB code: 7p9k was solved by D.M.Picton, Y.Luyten, R.D.Morgan, A.Nelson, D.L.Smith, D.T.F.Dryden, J.C.D.Hinton, T.R.Blower, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 72.89 / 2.12
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 214.62, 67.256, 126.547, 90, 102.05, 90
R / Rfree (%) 20.4 / 25.2

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Phage Resistance Protein (pdb code 7p9k). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Phage Resistance Protein, PDB code: 7p9k:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 7p9k

Go back to Chlorine Binding Sites List in 7p9k
Chlorine binding site 1 out of 2 in the Phage Resistance Protein


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Phage Resistance Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl601

b:72.6
occ:1.00
O A:HOH845 2.7 66.5 1.0
O A:HOH832 3.1 60.3 1.0
O A:HOH810 3.4 59.1 1.0
N A:GLY398 3.6 51.8 1.0
N A:LEU399 3.7 45.7 1.0
N A:ASP400 4.0 51.3 1.0
CA A:GLY398 4.0 53.6 1.0
C A:GLY398 4.1 51.9 1.0
CB A:ASP400 4.4 54.5 1.0
C A:SER397 4.6 58.5 1.0
CA A:LEU399 4.6 50.1 1.0
CG A:ASP400 4.6 59.1 1.0
CB A:LEU399 4.7 49.2 1.0
CA A:SER397 4.8 62.5 1.0
C A:LEU399 4.8 51.7 1.0
OD2 A:ASP400 4.8 62.5 1.0
CA A:ASP400 4.8 49.8 1.0
O A:GLY398 4.9 51.6 1.0

Chlorine binding site 2 out of 2 in 7p9k

Go back to Chlorine Binding Sites List in 7p9k
Chlorine binding site 2 out of 2 in the Phage Resistance Protein


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Phage Resistance Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl601

b:69.3
occ:1.00
O B:HOH854 2.4 64.9 1.0
O B:HOH860 2.9 64.8 1.0
O B:HOH865 3.2 61.0 1.0
N B:LEU399 3.6 42.6 1.0
N B:ASP400 3.6 47.9 1.0
O B:HOH799 3.7 53.3 1.0
N B:GLY398 3.7 58.4 1.0
CG B:ASP400 4.1 57.1 1.0
C B:GLY398 4.1 50.2 1.0
CA B:GLY398 4.1 52.0 1.0
CB B:ASP400 4.1 48.5 1.0
OD2 B:ASP400 4.2 56.6 1.0
CB B:LEU399 4.3 46.7 1.0
CA B:LEU399 4.3 48.2 1.0
OD1 B:ASP400 4.4 53.1 1.0
C B:LEU399 4.5 48.9 1.0
CA B:ASP400 4.5 47.6 1.0
C B:SER397 4.8 55.6 1.0
O B:GLY398 5.0 48.8 1.0
CA B:SER397 5.0 61.1 1.0

Reference:

D.M.Picton, Y.A.Luyten, R.D.Morgan, A.Nelson, D.L.Smith, D.T.F.Dryden, J.C.D.Hinton, T.R.Blower. The Phage Defence Island of A Multidrug Resistant Plasmid Uses Both Brex and Type IV Restriction For Complementary Protection From Viruses. Nucleic Acids Res. V. 49 11257 2021.
ISSN: ESSN 1362-4962
PubMed: 34657954
DOI: 10.1093/NAR/GKAB906
Page generated: Tue Jul 30 02:20:17 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy