Chlorine in PDB 7u00: The Crystal Structure of Wt CYP199A4 Bound to 4-(2-Chloroethyl)Benzoic Acid
Protein crystallography data
The structure of The Crystal Structure of Wt CYP199A4 Bound to 4-(2-Chloroethyl)Benzoic Acid, PDB code: 7u00
was solved by
M.N.Podgorski,
S.G.Bell,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
43.15 /
1.66
|
Space group
|
P 1 21 1
|
Cell size a, b, c (Å), α, β, γ (°)
|
44.137,
51.43,
79.334,
90,
91.98,
90
|
R / Rfree (%)
|
16.7 /
20
|
Other elements in 7u00:
The structure of The Crystal Structure of Wt CYP199A4 Bound to 4-(2-Chloroethyl)Benzoic Acid also contains other interesting chemical elements:
Chlorine Binding Sites:
The binding sites of Chlorine atom in the The Crystal Structure of Wt CYP199A4 Bound to 4-(2-Chloroethyl)Benzoic Acid
(pdb code 7u00). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the
The Crystal Structure of Wt CYP199A4 Bound to 4-(2-Chloroethyl)Benzoic Acid, PDB code: 7u00:
Jump to Chlorine binding site number:
1;
2;
3;
Chlorine binding site 1 out
of 3 in 7u00
Go back to
Chlorine Binding Sites List in 7u00
Chlorine binding site 1 out
of 3 in the The Crystal Structure of Wt CYP199A4 Bound to 4-(2-Chloroethyl)Benzoic Acid
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of The Crystal Structure of Wt CYP199A4 Bound to 4-(2-Chloroethyl)Benzoic Acid within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl502
b:8.6
occ:0.43
|
CL09
|
A:L4I502
|
0.0
|
8.6
|
0.4
|
H081
|
A:L4I502
|
0.9
|
13.8
|
0.6
|
C08
|
A:L4I502
|
1.3
|
11.6
|
0.6
|
CL09
|
A:L4I502
|
1.7
|
11.1
|
0.6
|
C08
|
A:L4I502
|
1.8
|
11.4
|
0.4
|
H082
|
A:L4I502
|
2.0
|
13.8
|
0.6
|
H082
|
A:L4I502
|
2.3
|
13.6
|
0.4
|
H081
|
A:L4I502
|
2.3
|
13.6
|
0.4
|
C07
|
A:L4I502
|
2.5
|
10.6
|
0.6
|
H071
|
A:L4I502
|
2.7
|
12.6
|
0.6
|
H071
|
A:L4I502
|
2.7
|
12.5
|
0.4
|
C07
|
A:L4I502
|
2.7
|
10.5
|
0.4
|
FE
|
A:HEM501
|
3.2
|
10.5
|
1.0
|
NA
|
A:HEM501
|
3.2
|
7.8
|
1.0
|
H072
|
A:L4I502
|
3.2
|
12.6
|
0.6
|
C06
|
A:L4I502
|
3.4
|
9.5
|
0.6
|
CG2
|
A:THR252
|
3.4
|
7.6
|
1.0
|
NB
|
A:HEM501
|
3.5
|
7.6
|
1.0
|
H011
|
A:L4I502
|
3.5
|
12.6
|
0.6
|
C06
|
A:L4I502
|
3.5
|
9.5
|
0.4
|
H072
|
A:L4I502
|
3.5
|
12.5
|
0.4
|
CB
|
A:ALA248
|
3.5
|
11.6
|
1.0
|
H011
|
A:L4I502
|
3.6
|
12.6
|
0.4
|
ND
|
A:HEM501
|
3.6
|
6.8
|
1.0
|
C4A
|
A:HEM501
|
3.7
|
9.4
|
1.0
|
C01
|
A:L4I502
|
3.8
|
10.5
|
0.6
|
NC
|
A:HEM501
|
3.8
|
11.4
|
1.0
|
C01
|
A:L4I502
|
3.8
|
10.5
|
0.4
|
C1B
|
A:HEM501
|
3.9
|
10.8
|
1.0
|
CHB
|
A:HEM501
|
4.0
|
8.9
|
1.0
|
CZ
|
A:PHE182
|
4.0
|
13.1
|
1.0
|
C1A
|
A:HEM501
|
4.0
|
9.7
|
1.0
|
O
|
A:ALA248
|
4.1
|
12.7
|
1.0
|
C4D
|
A:HEM501
|
4.2
|
7.4
|
1.0
|
CA
|
A:ALA248
|
4.3
|
9.4
|
1.0
|
C1D
|
A:HEM501
|
4.3
|
9.4
|
1.0
|
CE2
|
A:PHE182
|
4.3
|
11.0
|
1.0
|
C4B
|
A:HEM501
|
4.4
|
9.7
|
1.0
|
CHA
|
A:HEM501
|
4.4
|
8.2
|
1.0
|
C05
|
A:L4I502
|
4.5
|
10.0
|
0.6
|
C05
|
A:L4I502
|
4.5
|
9.9
|
0.4
|
C4C
|
A:HEM501
|
4.5
|
10.8
|
1.0
|
CB
|
A:THR252
|
4.6
|
9.2
|
1.0
|
CHD
|
A:HEM501
|
4.6
|
8.4
|
1.0
|
H051
|
A:L4I502
|
4.6
|
11.9
|
0.6
|
C1C
|
A:HEM501
|
4.7
|
11.2
|
1.0
|
H051
|
A:L4I502
|
4.7
|
11.8
|
0.4
|
C3A
|
A:HEM501
|
4.7
|
8.9
|
1.0
|
C
|
A:ALA248
|
4.7
|
10.4
|
1.0
|
CG2
|
A:VAL295
|
4.8
|
10.9
|
1.0
|
C2A
|
A:HEM501
|
4.8
|
10.1
|
1.0
|
CHC
|
A:HEM501
|
4.9
|
8.9
|
1.0
|
|
Chlorine binding site 2 out
of 3 in 7u00
Go back to
Chlorine Binding Sites List in 7u00
Chlorine binding site 2 out
of 3 in the The Crystal Structure of Wt CYP199A4 Bound to 4-(2-Chloroethyl)Benzoic Acid
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of The Crystal Structure of Wt CYP199A4 Bound to 4-(2-Chloroethyl)Benzoic Acid within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl502
b:11.1
occ:0.57
|
CL09
|
A:L4I502
|
0.0
|
11.1
|
0.6
|
H082
|
A:L4I502
|
1.5
|
13.6
|
0.4
|
CL09
|
A:L4I502
|
1.7
|
8.6
|
0.4
|
C08
|
A:L4I502
|
1.8
|
11.6
|
0.6
|
C08
|
A:L4I502
|
1.8
|
11.4
|
0.4
|
H082
|
A:L4I502
|
2.3
|
13.8
|
0.6
|
H081
|
A:L4I502
|
2.3
|
13.8
|
0.6
|
H081
|
A:L4I502
|
2.6
|
13.6
|
0.4
|
H071
|
A:L4I502
|
2.7
|
12.5
|
0.4
|
C07
|
A:L4I502
|
2.7
|
10.6
|
0.6
|
H071
|
A:L4I502
|
2.7
|
12.6
|
0.6
|
C07
|
A:L4I502
|
2.8
|
10.5
|
0.4
|
H072
|
A:L4I502
|
3.0
|
12.6
|
0.6
|
C4A
|
A:HEM501
|
3.2
|
9.4
|
1.0
|
H072
|
A:L4I502
|
3.2
|
12.5
|
0.4
|
CHB
|
A:HEM501
|
3.3
|
8.9
|
1.0
|
NA
|
A:HEM501
|
3.3
|
7.8
|
1.0
|
CG2
|
A:VAL295
|
3.4
|
10.9
|
1.0
|
CE2
|
A:PHE182
|
3.7
|
11.0
|
1.0
|
C1B
|
A:HEM501
|
3.7
|
10.8
|
1.0
|
CG1
|
A:VAL295
|
3.8
|
9.8
|
1.0
|
CG2
|
A:THR252
|
3.8
|
7.6
|
1.0
|
NB
|
A:HEM501
|
3.8
|
7.6
|
1.0
|
CZ
|
A:PHE182
|
3.9
|
13.1
|
1.0
|
C3A
|
A:HEM501
|
3.9
|
8.9
|
1.0
|
FE
|
A:HEM501
|
4.1
|
10.5
|
1.0
|
C1A
|
A:HEM501
|
4.1
|
9.7
|
1.0
|
C06
|
A:L4I502
|
4.1
|
9.5
|
0.6
|
C06
|
A:L4I502
|
4.1
|
9.5
|
0.4
|
CB
|
A:VAL295
|
4.2
|
9.5
|
1.0
|
CZ
|
A:PHE298
|
4.2
|
12.1
|
1.0
|
CE2
|
A:PHE298
|
4.3
|
11.1
|
1.0
|
C2A
|
A:HEM501
|
4.4
|
10.1
|
1.0
|
H011
|
A:L4I502
|
4.4
|
12.6
|
0.6
|
H011
|
A:L4I502
|
4.4
|
12.6
|
0.4
|
C2B
|
A:HEM501
|
4.7
|
8.5
|
1.0
|
C01
|
A:L4I502
|
4.7
|
10.5
|
0.6
|
C01
|
A:L4I502
|
4.7
|
10.5
|
0.4
|
CMA
|
A:HEM501
|
4.7
|
9.4
|
1.0
|
ND
|
A:HEM501
|
4.8
|
6.8
|
1.0
|
C4B
|
A:HEM501
|
4.8
|
9.7
|
1.0
|
CHA
|
A:HEM501
|
4.9
|
8.2
|
1.0
|
CD2
|
A:PHE182
|
4.9
|
10.8
|
1.0
|
CB
|
A:THR252
|
5.0
|
9.2
|
1.0
|
|
Chlorine binding site 3 out
of 3 in 7u00
Go back to
Chlorine Binding Sites List in 7u00
Chlorine binding site 3 out
of 3 in the The Crystal Structure of Wt CYP199A4 Bound to 4-(2-Chloroethyl)Benzoic Acid
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of The Crystal Structure of Wt CYP199A4 Bound to 4-(2-Chloroethyl)Benzoic Acid within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl503
b:37.6
occ:1.00
|
OH
|
A:TYR177
|
2.7
|
14.8
|
1.0
|
OD1
|
A:ASN207
|
2.9
|
18.0
|
1.0
|
O
|
A:HOH975
|
3.2
|
22.4
|
1.0
|
ND2
|
A:ASN207
|
3.4
|
16.8
|
1.0
|
CG
|
A:ASN207
|
3.4
|
18.7
|
1.0
|
CZ
|
A:TYR177
|
3.4
|
11.8
|
1.0
|
CE1
|
A:TYR177
|
3.4
|
11.4
|
1.0
|
O
|
A:HOH913
|
3.6
|
14.3
|
1.0
|
CD
|
A:ARG243
|
3.9
|
13.8
|
1.0
|
CB
|
A:GLN203
|
3.9
|
16.6
|
1.0
|
CA
|
A:GLN203
|
3.9
|
15.2
|
1.0
|
O
|
A:GLN203
|
4.0
|
12.1
|
1.0
|
CG
|
A:GLN203
|
4.2
|
22.9
|
1.0
|
OE1
|
A:GLN203
|
4.3
|
27.8
|
1.0
|
CG
|
A:ARG243
|
4.4
|
6.8
|
1.0
|
CG1
|
A:VAL206
|
4.4
|
13.1
|
1.0
|
C
|
A:GLN203
|
4.4
|
16.0
|
1.0
|
CB
|
A:VAL206
|
4.6
|
7.7
|
1.0
|
CE2
|
A:TYR177
|
4.6
|
11.0
|
1.0
|
N
|
A:ASN207
|
4.6
|
14.2
|
1.0
|
CB
|
A:ASN207
|
4.6
|
13.7
|
1.0
|
CD1
|
A:TYR177
|
4.7
|
8.6
|
1.0
|
CD
|
A:GLN203
|
4.7
|
32.1
|
1.0
|
NH2
|
A:ARG243
|
4.8
|
10.8
|
1.0
|
CD
|
A:ARG92
|
4.8
|
10.0
|
1.0
|
O
|
A:HOH713
|
4.9
|
12.9
|
1.0
|
NE
|
A:ARG243
|
5.0
|
9.3
|
1.0
|
CA
|
A:ASN207
|
5.0
|
11.9
|
1.0
|
|
Reference:
M.N.Podgorski,
S.G.Bell.
The Crystal Structure of Wt CYP199A4 Bound to 4-(2-Chloroethyl)Benzoic Acid To Be Published.
Page generated: Tue Jul 30 04:54:07 2024
|