Chlorine in PDB 7u00: The Crystal Structure of Wt CYP199A4 Bound to 4-(2-Chloroethyl)Benzoic Acid

Protein crystallography data

The structure of The Crystal Structure of Wt CYP199A4 Bound to 4-(2-Chloroethyl)Benzoic Acid, PDB code: 7u00 was solved by M.N.Podgorski, S.G.Bell, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 43.15 / 1.66
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 44.137, 51.43, 79.334, 90, 91.98, 90
R / Rfree (%) 16.7 / 20

Other elements in 7u00:

The structure of The Crystal Structure of Wt CYP199A4 Bound to 4-(2-Chloroethyl)Benzoic Acid also contains other interesting chemical elements:

Iron (Fe) 1 atom
Magnesium (Mg) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the The Crystal Structure of Wt CYP199A4 Bound to 4-(2-Chloroethyl)Benzoic Acid (pdb code 7u00). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the The Crystal Structure of Wt CYP199A4 Bound to 4-(2-Chloroethyl)Benzoic Acid, PDB code: 7u00:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in 7u00

Go back to Chlorine Binding Sites List in 7u00
Chlorine binding site 1 out of 3 in the The Crystal Structure of Wt CYP199A4 Bound to 4-(2-Chloroethyl)Benzoic Acid


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of The Crystal Structure of Wt CYP199A4 Bound to 4-(2-Chloroethyl)Benzoic Acid within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl502

b:8.6
occ:0.43
CL09 A:L4I502 0.0 8.6 0.4
H081 A:L4I502 0.9 13.8 0.6
C08 A:L4I502 1.3 11.6 0.6
CL09 A:L4I502 1.7 11.1 0.6
C08 A:L4I502 1.8 11.4 0.4
H082 A:L4I502 2.0 13.8 0.6
H082 A:L4I502 2.3 13.6 0.4
H081 A:L4I502 2.3 13.6 0.4
C07 A:L4I502 2.5 10.6 0.6
H071 A:L4I502 2.7 12.6 0.6
H071 A:L4I502 2.7 12.5 0.4
C07 A:L4I502 2.7 10.5 0.4
FE A:HEM501 3.2 10.5 1.0
NA A:HEM501 3.2 7.8 1.0
H072 A:L4I502 3.2 12.6 0.6
C06 A:L4I502 3.4 9.5 0.6
CG2 A:THR252 3.4 7.6 1.0
NB A:HEM501 3.5 7.6 1.0
H011 A:L4I502 3.5 12.6 0.6
C06 A:L4I502 3.5 9.5 0.4
H072 A:L4I502 3.5 12.5 0.4
CB A:ALA248 3.5 11.6 1.0
H011 A:L4I502 3.6 12.6 0.4
ND A:HEM501 3.6 6.8 1.0
C4A A:HEM501 3.7 9.4 1.0
C01 A:L4I502 3.8 10.5 0.6
NC A:HEM501 3.8 11.4 1.0
C01 A:L4I502 3.8 10.5 0.4
C1B A:HEM501 3.9 10.8 1.0
CHB A:HEM501 4.0 8.9 1.0
CZ A:PHE182 4.0 13.1 1.0
C1A A:HEM501 4.0 9.7 1.0
O A:ALA248 4.1 12.7 1.0
C4D A:HEM501 4.2 7.4 1.0
CA A:ALA248 4.3 9.4 1.0
C1D A:HEM501 4.3 9.4 1.0
CE2 A:PHE182 4.3 11.0 1.0
C4B A:HEM501 4.4 9.7 1.0
CHA A:HEM501 4.4 8.2 1.0
C05 A:L4I502 4.5 10.0 0.6
C05 A:L4I502 4.5 9.9 0.4
C4C A:HEM501 4.5 10.8 1.0
CB A:THR252 4.6 9.2 1.0
CHD A:HEM501 4.6 8.4 1.0
H051 A:L4I502 4.6 11.9 0.6
C1C A:HEM501 4.7 11.2 1.0
H051 A:L4I502 4.7 11.8 0.4
C3A A:HEM501 4.7 8.9 1.0
C A:ALA248 4.7 10.4 1.0
CG2 A:VAL295 4.8 10.9 1.0
C2A A:HEM501 4.8 10.1 1.0
CHC A:HEM501 4.9 8.9 1.0

Chlorine binding site 2 out of 3 in 7u00

Go back to Chlorine Binding Sites List in 7u00
Chlorine binding site 2 out of 3 in the The Crystal Structure of Wt CYP199A4 Bound to 4-(2-Chloroethyl)Benzoic Acid


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of The Crystal Structure of Wt CYP199A4 Bound to 4-(2-Chloroethyl)Benzoic Acid within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl502

b:11.1
occ:0.57
CL09 A:L4I502 0.0 11.1 0.6
H082 A:L4I502 1.5 13.6 0.4
CL09 A:L4I502 1.7 8.6 0.4
C08 A:L4I502 1.8 11.6 0.6
C08 A:L4I502 1.8 11.4 0.4
H082 A:L4I502 2.3 13.8 0.6
H081 A:L4I502 2.3 13.8 0.6
H081 A:L4I502 2.6 13.6 0.4
H071 A:L4I502 2.7 12.5 0.4
C07 A:L4I502 2.7 10.6 0.6
H071 A:L4I502 2.7 12.6 0.6
C07 A:L4I502 2.8 10.5 0.4
H072 A:L4I502 3.0 12.6 0.6
C4A A:HEM501 3.2 9.4 1.0
H072 A:L4I502 3.2 12.5 0.4
CHB A:HEM501 3.3 8.9 1.0
NA A:HEM501 3.3 7.8 1.0
CG2 A:VAL295 3.4 10.9 1.0
CE2 A:PHE182 3.7 11.0 1.0
C1B A:HEM501 3.7 10.8 1.0
CG1 A:VAL295 3.8 9.8 1.0
CG2 A:THR252 3.8 7.6 1.0
NB A:HEM501 3.8 7.6 1.0
CZ A:PHE182 3.9 13.1 1.0
C3A A:HEM501 3.9 8.9 1.0
FE A:HEM501 4.1 10.5 1.0
C1A A:HEM501 4.1 9.7 1.0
C06 A:L4I502 4.1 9.5 0.6
C06 A:L4I502 4.1 9.5 0.4
CB A:VAL295 4.2 9.5 1.0
CZ A:PHE298 4.2 12.1 1.0
CE2 A:PHE298 4.3 11.1 1.0
C2A A:HEM501 4.4 10.1 1.0
H011 A:L4I502 4.4 12.6 0.6
H011 A:L4I502 4.4 12.6 0.4
C2B A:HEM501 4.7 8.5 1.0
C01 A:L4I502 4.7 10.5 0.6
C01 A:L4I502 4.7 10.5 0.4
CMA A:HEM501 4.7 9.4 1.0
ND A:HEM501 4.8 6.8 1.0
C4B A:HEM501 4.8 9.7 1.0
CHA A:HEM501 4.9 8.2 1.0
CD2 A:PHE182 4.9 10.8 1.0
CB A:THR252 5.0 9.2 1.0

Chlorine binding site 3 out of 3 in 7u00

Go back to Chlorine Binding Sites List in 7u00
Chlorine binding site 3 out of 3 in the The Crystal Structure of Wt CYP199A4 Bound to 4-(2-Chloroethyl)Benzoic Acid


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of The Crystal Structure of Wt CYP199A4 Bound to 4-(2-Chloroethyl)Benzoic Acid within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl503

b:37.6
occ:1.00
OH A:TYR177 2.7 14.8 1.0
OD1 A:ASN207 2.9 18.0 1.0
O A:HOH975 3.2 22.4 1.0
ND2 A:ASN207 3.4 16.8 1.0
CG A:ASN207 3.4 18.7 1.0
CZ A:TYR177 3.4 11.8 1.0
CE1 A:TYR177 3.4 11.4 1.0
O A:HOH913 3.6 14.3 1.0
CD A:ARG243 3.9 13.8 1.0
CB A:GLN203 3.9 16.6 1.0
CA A:GLN203 3.9 15.2 1.0
O A:GLN203 4.0 12.1 1.0
CG A:GLN203 4.2 22.9 1.0
OE1 A:GLN203 4.3 27.8 1.0
CG A:ARG243 4.4 6.8 1.0
CG1 A:VAL206 4.4 13.1 1.0
C A:GLN203 4.4 16.0 1.0
CB A:VAL206 4.6 7.7 1.0
CE2 A:TYR177 4.6 11.0 1.0
N A:ASN207 4.6 14.2 1.0
CB A:ASN207 4.6 13.7 1.0
CD1 A:TYR177 4.7 8.6 1.0
CD A:GLN203 4.7 32.1 1.0
NH2 A:ARG243 4.8 10.8 1.0
CD A:ARG92 4.8 10.0 1.0
O A:HOH713 4.9 12.9 1.0
NE A:ARG243 5.0 9.3 1.0
CA A:ASN207 5.0 11.9 1.0

Reference:

M.N.Podgorski, S.G.Bell. The Crystal Structure of Wt CYP199A4 Bound to 4-(2-Chloroethyl)Benzoic Acid To Be Published.
Page generated: Tue Jul 30 04:54:07 2024

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