Chlorine in PDB 7vc2: Toxoplasma Gondii Prolyl-Trna Synthetase (Tgprs) in Complex with Inhibitor L96 and L-Proline in Space Group P21

Protein crystallography data

The structure of Toxoplasma Gondii Prolyl-Trna Synthetase (Tgprs) in Complex with Inhibitor L96 and L-Proline in Space Group P21, PDB code: 7vc2 was solved by Y.Manickam, N.Malhotra, A.Sharma, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.42 / 2.10
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 77.1, 81.62, 104.88, 90, 102.68, 90
R / Rfree (%) 17.7 / 21.8

Other elements in 7vc2:

The structure of Toxoplasma Gondii Prolyl-Trna Synthetase (Tgprs) in Complex with Inhibitor L96 and L-Proline in Space Group P21 also contains other interesting chemical elements:

Fluorine (F) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Toxoplasma Gondii Prolyl-Trna Synthetase (Tgprs) in Complex with Inhibitor L96 and L-Proline in Space Group P21 (pdb code 7vc2). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Toxoplasma Gondii Prolyl-Trna Synthetase (Tgprs) in Complex with Inhibitor L96 and L-Proline in Space Group P21, PDB code: 7vc2:

Chlorine binding site 1 out of 1 in 7vc2

Go back to Chlorine Binding Sites List in 7vc2
Chlorine binding site 1 out of 1 in the Toxoplasma Gondii Prolyl-Trna Synthetase (Tgprs) in Complex with Inhibitor L96 and L-Proline in Space Group P21


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Toxoplasma Gondii Prolyl-Trna Synthetase (Tgprs) in Complex with Inhibitor L96 and L-Proline in Space Group P21 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl910

b:85.4
occ:1.00
OH B:TYR830 3.4 73.2 1.0
CD1 B:LEU480 3.9 50.2 1.0
CD2 B:TYR346 4.2 40.7 1.0
CE2 B:PHE342 4.2 48.3 1.0
CG B:TYR346 4.3 44.9 1.0
CB B:TYR346 4.4 40.3 1.0
CA B:SER343 4.4 49.8 1.0
CZ B:TYR830 4.5 63.2 1.0
CG2 B:THR477 4.5 53.8 1.0
CD2 B:PHE342 4.5 43.5 1.0
CB B:SER343 4.6 51.4 1.0
CE2 B:TYR830 4.6 59.3 1.0
SD B:MET601 4.7 43.5 1.0
CE2 B:TYR346 4.8 39.8 1.0
CD1 B:TYR346 4.9 38.7 1.0

Reference:

N.Malhotra, Y.Manickam, A.Sharma. Tgprs with Inhibitors To Be Published.
Page generated: Tue Jul 30 05:19:20 2024

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