Chlorine in PDB 7vpe: Falcilysin in Complex with A1

Protein crystallography data

The structure of Falcilysin in Complex with A1, PDB code: 7vpe was solved by J.Q.Lin, A.El Sahili, J.Lescar, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 46.92 / 1.62
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 93.663, 106.157, 126.122, 90, 90, 90
R / Rfree (%) 18 / 19.6

Other elements in 7vpe:

The structure of Falcilysin in Complex with A1 also contains other interesting chemical elements:

Sodium (Na) 1 atom
Zinc (Zn) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Falcilysin in Complex with A1 (pdb code 7vpe). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 6 binding sites of Chlorine where determined in the Falcilysin in Complex with A1, PDB code: 7vpe:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5; 6;

Chlorine binding site 1 out of 6 in 7vpe

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Chlorine binding site 1 out of 6 in the Falcilysin in Complex with A1


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Falcilysin in Complex with A1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1204

b:29.1
occ:1.00
O A:HOH2139 2.5 39.7 1.0
OG A:SER123 3.2 26.7 1.0
N A:HIS122 3.2 24.0 1.0
O A:HOH1695 3.2 24.3 1.0
N A:SER123 3.7 22.7 1.0
CB A:SER123 3.9 24.9 1.0
CA A:HIS122 4.0 25.0 1.0
CD1 A:ILE127 4.0 24.0 1.0
C A:HIS122 4.0 27.2 1.0
CA A:THR121 4.0 18.6 1.0
C A:THR121 4.1 21.8 1.0
CB A:THR121 4.2 22.9 1.0
CB A:HIS122 4.3 26.6 1.0
CA A:SER123 4.3 25.1 1.0
CE2 A:PHE291 4.4 21.9 1.0
CD2 A:PHE291 4.6 21.6 1.0
O A:SER123 4.7 23.9 1.0
CG1 A:ILE127 4.7 25.0 1.0
C A:SER123 4.8 27.7 1.0
O A:HIS122 4.8 28.8 1.0
CG2 A:THR121 4.8 24.5 1.0
CD2 A:HIS122 5.0 29.3 1.0

Chlorine binding site 2 out of 6 in 7vpe

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Chlorine binding site 2 out of 6 in the Falcilysin in Complex with A1


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Falcilysin in Complex with A1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1205

b:29.1
occ:1.00
NE A:ARG1067 3.1 44.6 1.0
N A:ARG1067 3.2 23.8 1.0
NH2 A:ARG1067 3.2 32.2 1.0
O A:HOH1981 3.4 30.5 1.0
N A:TYR868 3.4 22.0 1.0
CD2 A:TYR868 3.5 25.6 1.0
CZ A:ARG1067 3.6 44.7 1.0
CB A:SER1008 3.7 23.8 1.0
N A:GLY867 3.8 22.1 1.0
CB A:TYR868 3.9 24.5 1.0
CA A:ARG1067 4.0 26.7 1.0
O A:ASN1007 4.0 23.6 1.0
CA A:ALA1066 4.1 22.6 1.0
C A:ALA1066 4.1 25.4 1.0
CA A:GLY867 4.2 20.4 1.0
CG A:TYR868 4.2 24.5 1.0
CG A:ARG1067 4.2 33.4 1.0
CD A:ARG1067 4.2 39.8 1.0
C A:GLY867 4.2 20.4 1.0
CA A:TYR868 4.2 23.2 1.0
OG A:SER1008 4.3 23.4 1.0
CE2 A:TYR868 4.5 31.2 1.0
CB A:ALA1066 4.5 23.8 1.0
O A:HOH1706 4.5 30.5 1.0
CA A:SER1008 4.6 22.2 1.0
C A:LYS866 4.6 24.5 1.0
C A:ASN1007 4.7 22.4 1.0
CB A:ARG1067 4.7 27.7 1.0
N A:SER1008 4.8 22.6 1.0
NH1 A:ARG1067 4.9 37.1 1.0

Chlorine binding site 3 out of 6 in 7vpe

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Chlorine binding site 3 out of 6 in the Falcilysin in Complex with A1


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Falcilysin in Complex with A1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1206

b:30.6
occ:1.00
O A:HOH1797 3.1 23.6 1.0
ND2 A:ASN857 3.1 25.2 1.0
ND2 A:ASN442 3.3 29.6 1.0
CE A:LYS466 3.5 32.8 1.0
CB A:ASN857 3.7 22.1 1.0
O A:HOH2044 3.7 39.6 1.0
NZ A:LYS466 3.8 35.5 1.0
CG A:ASN857 3.9 22.3 1.0
CA A:ASN857 4.0 20.4 1.0
CB A:ASN442 4.0 18.6 1.0
CG A:ASN442 4.1 24.5 1.0
CA A:GLY464 4.2 23.4 1.0
N A:ASN857 4.4 17.4 1.0
O A:HOH2233 4.5 28.7 1.0
O A:HOH2013 4.6 42.5 1.0
OE1 A:GLU362 4.8 34.9 1.0
O A:GLY464 4.8 21.8 1.0
CD A:LYS466 4.9 28.1 1.0
CG2 A:ILE856 4.9 19.6 1.0
O A:LYS853 4.9 19.6 1.0
C A:GLY464 5.0 21.4 1.0

Chlorine binding site 4 out of 6 in 7vpe

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Chlorine binding site 4 out of 6 in the Falcilysin in Complex with A1


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Falcilysin in Complex with A1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1207

b:27.3
occ:1.00
O A:HOH2169 3.1 22.7 1.0
O A:HOH1662 3.2 26.8 1.0
NH2 A:ARG783 3.2 21.5 1.0
NH1 A:ARG783 3.3 19.7 1.0
CD A:PRO427 3.5 21.9 1.0
CZ A:ARG783 3.7 19.9 1.0
CB A:THR426 3.8 18.0 1.0
CG2 A:THR426 3.9 19.8 1.0
CA A:THR426 4.2 17.6 1.0
O A:HOH2311 4.5 41.0 1.0
CG A:PRO427 4.5 20.0 1.0
O A:HOH2142 4.6 34.7 1.0
OE1 A:GLU768 4.6 22.1 1.0
N A:PRO427 4.6 20.1 1.0
O A:HOH1559 4.7 22.7 1.0
CG1 A:VAL780 4.7 18.8 1.0
CB A:GLU768 4.7 19.2 1.0
O A:HOH2333 4.8 36.0 1.0
O A:HOH1432 4.9 21.9 1.0
C A:THR426 4.9 17.9 1.0
OG1 A:THR426 5.0 18.4 1.0

Chlorine binding site 5 out of 6 in 7vpe

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Chlorine binding site 5 out of 6 in the Falcilysin in Complex with A1


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Falcilysin in Complex with A1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1208

b:38.9
occ:1.00
NE A:ARG854 3.2 23.9 1.0
NZ A:LYS855 3.3 28.8 1.0
NH2 A:ARG854 3.4 22.8 1.0
O A:HOH2226 3.6 40.0 1.0
CZ A:ARG854 3.7 21.2 1.0
CE A:LYS855 3.9 23.3 1.0
CG A:LYS855 3.9 22.9 1.0
CG2 A:THR764 4.2 19.8 1.0
CD A:ARG854 4.3 24.3 1.0
CG A:ARG854 4.3 20.2 1.0
CD A:LYS855 4.5 24.2 1.0
OG1 A:THR764 4.6 23.8 1.0
O A:HOH1746 4.9 34.2 1.0

Chlorine binding site 6 out of 6 in 7vpe

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Chlorine binding site 6 out of 6 in the Falcilysin in Complex with A1


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 6 of Falcilysin in Complex with A1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1209

b:31.2
occ:1.00
O A:HOH1332 3.3 32.1 1.0
N A:SER273 3.4 20.4 1.0
ND2 A:ASN166 3.4 21.5 1.0
OG A:SER273 3.5 27.8 1.0
O A:ASN271 3.5 26.8 1.0
O A:HOH2103 3.6 36.5 1.0
CB A:ASN166 3.8 17.8 1.0
CA A:ASN166 3.8 16.8 1.0
CA A:ASN272 3.9 25.1 1.0
CG A:ASN166 4.1 19.2 1.0
C A:ASN272 4.1 23.7 1.0
CB A:SER273 4.1 23.6 1.0
OD1 A:ASN272 4.2 27.2 1.0
O A:HOH1931 4.2 33.5 1.0
CE1 A:HIS257 4.2 34.1 1.0
CA A:SER273 4.3 20.0 1.0
N A:ASN166 4.4 18.1 1.0
O A:HOH1788 4.4 42.9 1.0
C A:ASN271 4.5 28.4 1.0
ND1 A:HIS257 4.6 37.5 1.0
N A:ASN272 4.7 23.0 1.0
N A:GLY274 4.7 23.7 1.0
CG A:ASN272 4.8 32.4 1.0
CB A:ASN272 4.9 27.5 1.0
CE2 A:TYR256 4.9 31.5 1.0

Reference:

J.Q.Lin, J.Lescar. Title Is Not Available Yet As We Are Preparing the Manuscript. Will Update Again Once the Paper Is Out. To Be Published.
Page generated: Tue Apr 4 22:07:10 2023

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