Chlorine in PDB 7wgt: X-Ray Structure of Thermostabilized Drosophila Dopamine Transporter with Gaba TRANSPORTER1-Like Substitutions in the Binding Site, in Complex with NO711.

Protein crystallography data

The structure of X-Ray Structure of Thermostabilized Drosophila Dopamine Transporter with Gaba TRANSPORTER1-Like Substitutions in the Binding Site, in Complex with NO711., PDB code: 7wgt was solved by D.Joseph, A.Penmatsa, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.42 / 2.75
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 98.007, 135.025, 162.559, 90, 90, 90
R / Rfree (%) 24.8 / 29.6

Other elements in 7wgt:

The structure of X-Ray Structure of Thermostabilized Drosophila Dopamine Transporter with Gaba TRANSPORTER1-Like Substitutions in the Binding Site, in Complex with NO711. also contains other interesting chemical elements:

Sodium (Na) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the X-Ray Structure of Thermostabilized Drosophila Dopamine Transporter with Gaba TRANSPORTER1-Like Substitutions in the Binding Site, in Complex with NO711. (pdb code 7wgt). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the X-Ray Structure of Thermostabilized Drosophila Dopamine Transporter with Gaba TRANSPORTER1-Like Substitutions in the Binding Site, in Complex with NO711., PDB code: 7wgt:

Chlorine binding site 1 out of 1 in 7wgt

Go back to Chlorine Binding Sites List in 7wgt
Chlorine binding site 1 out of 1 in the X-Ray Structure of Thermostabilized Drosophila Dopamine Transporter with Gaba TRANSPORTER1-Like Substitutions in the Binding Site, in Complex with NO711.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of X-Ray Structure of Thermostabilized Drosophila Dopamine Transporter with Gaba TRANSPORTER1-Like Substitutions in the Binding Site, in Complex with NO711. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl705

b:81.0
occ:1.00
OG A:SER356 3.0 89.9 1.0
OG A:SER320 3.1 80.7 1.0
NE2 A:GLN316 3.3 77.2 1.0
OH A:TYR69 3.5 82.4 1.0
CB A:SER320 3.6 79.2 1.0
CB A:SER356 3.9 84.0 1.0
ND2 A:ASN49 4.0 83.7 1.0
CB A:PHE53 4.2 75.5 1.0
CD A:GLN316 4.3 80.3 1.0
CE2 A:TYR69 4.3 83.1 1.0
CD1 A:PHE53 4.3 83.1 1.0
CZ A:TYR69 4.3 81.3 1.0
CG A:PHE53 4.3 83.5 1.0
CG A:GLN316 4.4 76.2 1.0
ND2 A:ASN352 4.5 78.1 1.0
CG A:ASN49 4.6 85.4 1.0
CA A:ASN49 4.8 84.2 1.0
O A:ASN352 4.9 83.9 1.0
O A:GLN316 4.9 75.3 1.0
OG A:SER353 5.0 92.7 1.0

Reference:

D.Joseph, S.R.Nayak, A.Penmatsa. Structural Insights Into Gaba Transport Inhibition Using An Engineered Neurotransmitter Transporter. Embo J. V. 41 10735 2022.
ISSN: ESSN 1460-2075
PubMed: 35796008
DOI: 10.15252/EMBJ.2022110735
Page generated: Tue Jul 30 05:38:37 2024

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