Chlorine in PDB 8aym: Resting State GLUA1/A2 Ampa Receptor in Complex with Tarp Gamma 8 and Ligand Jnj-55511118

Other elements in 8aym:

The structure of Resting State GLUA1/A2 Ampa Receptor in Complex with Tarp Gamma 8 and Ligand Jnj-55511118 also contains other interesting chemical elements:

Fluorine (F) 18 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Resting State GLUA1/A2 Ampa Receptor in Complex with Tarp Gamma 8 and Ligand Jnj-55511118 (pdb code 8aym). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Resting State GLUA1/A2 Ampa Receptor in Complex with Tarp Gamma 8 and Ligand Jnj-55511118, PDB code: 8aym:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 8aym

Go back to Chlorine Binding Sites List in 8aym
Chlorine binding site 1 out of 2 in the Resting State GLUA1/A2 Ampa Receptor in Complex with Tarp Gamma 8 and Ligand Jnj-55511118


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Resting State GLUA1/A2 Ampa Receptor in Complex with Tarp Gamma 8 and Ligand Jnj-55511118 within 5.0Å range:
probe atom residue distance (Å) B Occ
I:Cl501

b:12.3
occ:1.00
CL1 I:XVD501 0.0 12.3 1.0
C1 I:XVD501 1.8 12.3 1.0
C2 I:XVD501 2.7 12.3 1.0
C6 I:XVD501 2.8 12.3 1.0
C7 I:XVD501 3.1 12.3 1.0
CZ C:PHE527 3.5 9.8 1.0
CA I:GLY209 3.7 12.8 1.0
C12 I:XVD501 3.7 12.3 1.0
C8 I:XVD501 3.8 12.3 1.0
C3 I:XVD501 4.0 12.3 1.0
C5 I:XVD501 4.0 12.3 1.0
CE2 C:PHE527 4.2 9.8 1.0
CD2 I:TYR206 4.3 13.6 1.0
CE1 C:PHE527 4.4 9.8 1.0
CA I:TYR206 4.4 13.6 1.0
C I:GLY209 4.5 12.8 1.0
C4 I:XVD501 4.5 12.3 1.0
N I:GLY209 4.6 12.8 1.0
O I:TYR206 4.7 13.6 1.0
C9 I:XVD501 4.7 12.3 1.0
C11 I:XVD501 4.7 12.3 1.0
CB I:TYR206 4.8 13.6 1.0
C7 C:PLM906 4.9 11.6 1.0
O I:GLY209 5.0 12.8 1.0
CG I:TYR206 5.0 13.6 1.0

Chlorine binding site 2 out of 2 in 8aym

Go back to Chlorine Binding Sites List in 8aym
Chlorine binding site 2 out of 2 in the Resting State GLUA1/A2 Ampa Receptor in Complex with Tarp Gamma 8 and Ligand Jnj-55511118


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Resting State GLUA1/A2 Ampa Receptor in Complex with Tarp Gamma 8 and Ligand Jnj-55511118 within 5.0Å range:
probe atom residue distance (Å) B Occ
J:Cl1702

b:12.3
occ:1.00
CL1 J:XVD1702 0.0 12.3 1.0
C1 J:XVD1702 1.8 12.3 1.0
C2 J:XVD1702 2.7 12.3 1.0
C6 J:XVD1702 2.8 12.3 1.0
C7 J:XVD1702 3.1 12.3 1.0
CZ A:PHE527 3.5 9.8 1.0
CA J:GLY209 3.7 12.9 1.0
C12 J:XVD1702 3.7 12.3 1.0
C8 J:XVD1702 3.8 12.3 1.0
C3 J:XVD1702 4.0 12.3 1.0
C5 J:XVD1702 4.0 12.3 1.0
CE2 A:PHE527 4.2 9.8 1.0
CD2 J:TYR206 4.3 13.6 1.0
CE1 A:PHE527 4.4 9.8 1.0
CA J:TYR206 4.4 13.6 1.0
C J:GLY209 4.5 12.9 1.0
C4 J:XVD1702 4.6 12.3 1.0
N J:GLY209 4.6 12.9 1.0
O J:TYR206 4.7 13.6 1.0
C9 J:XVD1702 4.7 12.3 1.0
C11 J:XVD1702 4.7 12.3 1.0
CB J:TYR206 4.8 13.6 1.0
C7 A:PLM906 4.9 11.6 1.0
O J:GLY209 5.0 12.9 1.0
CG J:TYR206 5.0 13.6 1.0

Reference:

D.Zhang, R.Lape, S.A.Shaikh, B.K.Kohegyi, J.F.Watson, O.Cais, T.Nakagawa, I.H.Greger. Modulatory Mechanisms of Tarp Gamma 8-Selective Ampa Receptor Therapeutics. Nat Commun V. 14 1659 2023.
ISSN: ESSN 2041-1723
PubMed: 36966141
DOI: 10.1038/S41467-023-37259-5
Page generated: Tue Jul 30 06:57:07 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy