Chlorine in PDB 8bbv: Coproporphyrin III - Lmcpfc Soaked 2MIN with FE2+

Enzymatic activity of Coproporphyrin III - Lmcpfc Soaked 2MIN with FE2+

All present enzymatic activity of Coproporphyrin III - Lmcpfc Soaked 2MIN with FE2+:
4.99.1.9;

Protein crystallography data

The structure of Coproporphyrin III - Lmcpfc Soaked 2MIN with FE2+, PDB code: 8bbv was solved by T.Gabler, S.Hofbauer, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 34.30 / 2.19
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 36.615, 66.919, 61.802, 90, 103.22, 90
R / Rfree (%) 19.2 / 24.2

Other elements in 8bbv:

The structure of Coproporphyrin III - Lmcpfc Soaked 2MIN with FE2+ also contains other interesting chemical elements:

Iron (Fe) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Coproporphyrin III - Lmcpfc Soaked 2MIN with FE2+ (pdb code 8bbv). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Coproporphyrin III - Lmcpfc Soaked 2MIN with FE2+, PDB code: 8bbv:

Chlorine binding site 1 out of 1 in 8bbv

Go back to Chlorine Binding Sites List in 8bbv
Chlorine binding site 1 out of 1 in the Coproporphyrin III - Lmcpfc Soaked 2MIN with FE2+


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Coproporphyrin III - Lmcpfc Soaked 2MIN with FE2+ within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl406

b:62.5
occ:1.00
HE2 A:HIS87 2.3 53.8 1.0
HZ3 A:LYS86 2.4 55.2 1.0
HE1 A:TYR12 3.0 53.7 1.0
NE2 A:HIS87 3.1 44.8 1.0
OH A:TYR12 3.2 44.4 1.0
NZ A:LYS86 3.3 45.9 1.0
HZ1 A:LYS86 3.6 55.2 1.0
HD3 A:LYS86 3.6 49.6 1.0
HZ2 A:LYS86 3.6 55.2 1.0
CE1 A:TYR12 3.7 44.7 1.0
HE1 A:HIS87 3.7 56.5 1.0
CE1 A:HIS87 3.8 47.0 1.0
CZ A:TYR12 3.9 43.8 1.0
H28 A:HT9404 3.9 47.2 1.0
HE2 A:LYS86 4.2 55.5 1.0
CE A:LYS86 4.2 46.2 1.0
HG23 A:ILE28 4.2 53.5 1.0
CD2 A:HIS87 4.3 43.8 1.0
H6 A:HT9404 4.3 63.1 1.0
HE2 A:HIS30 4.3 92.4 1.0
C10 A:HT9404 4.3 40.5 1.0
C13 A:HT9404 4.4 43.9 1.0
CD A:LYS86 4.4 41.3 1.0
HD2 A:HIS87 4.5 52.6 1.0
C35 A:HT9404 4.6 39.2 1.0
FE A:FE405 4.6 44.7 0.2
C20 A:HT9404 4.6 40.1 1.0
H7 A:HT9404 4.7 63.1 1.0
N3 A:HT9404 4.7 43.3 1.0
HA A:ILE28 4.7 57.1 1.0
H3 A:HT9404 4.7 48.2 1.0
C11 A:HT9404 4.7 49.0 1.0
O A:ILE28 4.8 52.5 1.0
NE2 A:HIS30 4.9 76.9 1.0
CD1 A:TYR12 4.9 39.2 1.0
C22 A:HT9404 4.9 52.5 1.0
C12 A:HT9404 4.9 45.5 1.0
HD2 A:LYS86 4.9 49.6 1.0

Reference:

T.Gabler, S.Hofbauer. Coproporphyrin III - Lmcpfc Soaked 2MIN with FE2+ To Be Published.
Page generated: Tue Apr 4 22:32:31 2023

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