Chlorine in PDB 8f10: Structure of the MDM2 P53 Binding Domain in Complex with H102, An All- D Helicon Polypeptide

Enzymatic activity of Structure of the MDM2 P53 Binding Domain in Complex with H102, An All- D Helicon Polypeptide

All present enzymatic activity of Structure of the MDM2 P53 Binding Domain in Complex with H102, An All- D Helicon Polypeptide:
2.3.2.27;

Protein crystallography data

The structure of Structure of the MDM2 P53 Binding Domain in Complex with H102, An All- D Helicon Polypeptide, PDB code: 8f10 was solved by K.Li, A.J.Callahan, T.L.Travaline, O.S.Tokareva, J.-M.Swiecicki, G.L.Verdine, B.L.Pentelute, J.H.Mcgee, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 28.02 / 1.28
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 28.15, 39.92, 42.36, 90, 95.44, 90
R / Rfree (%) 15.4 / 16.7

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of the MDM2 P53 Binding Domain in Complex with H102, An All- D Helicon Polypeptide (pdb code 8f10). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Structure of the MDM2 P53 Binding Domain in Complex with H102, An All- D Helicon Polypeptide, PDB code: 8f10:

Chlorine binding site 1 out of 1 in 8f10

Go back to Chlorine Binding Sites List in 8f10
Chlorine binding site 1 out of 1 in the Structure of the MDM2 P53 Binding Domain in Complex with H102, An All- D Helicon Polypeptide


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of the MDM2 P53 Binding Domain in Complex with H102, An All- D Helicon Polypeptide within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl203

b:21.1
occ:1.00
 H A:LEU81 2.4 15.2 1.0
HA A:ASP80 2.8 14.8 1.0
HZ1 A:LYS64 3.0 25.5 1.0
N A:LEU81 3.2 12.6 1.0
HZ2 A:LYS64 3.3 25.5 1.0
OD1 A:ASP80 3.4 20.2 1.0
O A:HOH384 3.4 37.8 1.0
NZ A:LYS64 3.5 21.2 1.0
CG A:LEU81 3.7 30.0 1.0
CA A:ASP80 3.7 12.3 1.0
HZ3 A:LYS64 3.7 25.5 1.0
O A:HOH327 3.7 31.2 1.0
CG A:ASP80 3.8 13.3 1.0
O A:HOH331 3.9 30.7 1.0
C A:ASP80 3.9 12.7 1.0
HH A:TYR60 4.1 15.4 0.0
OH A:TYR60 4.2 12.8 1.0
CB A:LEU81 4.2 30.0 1.0
CB A:ASP80 4.3 14.0 1.0
O A:HOH304 4.3 19.6 1.0
CA A:LEU81 4.3 14.6 1.0
OD2 A:ASP80 4.3 13.7 1.0
O A:HOH348 4.3 36.2 1.0
CD1 A:LEU81 4.4 30.0 1.0
O A:ASN79 4.4 14.9 1.0
CD2 A:LEU81 4.5 30.0 1.0
HA A:LEU81 4.6 17.5 1.0
HB2 A:ASP80 4.6 16.8 1.0
N A:ASP80 4.8 13.5 1.0
CE A:LYS64 4.9 22.5 1.0

Reference:

A.J.Callahan, S.Gandhesiri, T.L.Travaline, L.Lozano Salazar, S.Hanna, Y.-C.Lee, K.Li, O.S.Tokareva, J.-M.Swiecicki, A.Loas, G.L.Verdine, J.H.Mcgee, B.L.Pentelute. Single-Shot Flow Synthesis of D-Proteins For Mirror-Image Phage Display Chemrxiv 2023.
ISSN: ISSN 2573-2293
DOI: 10.26434/CHEMRXIV-2023-X86XP
Page generated: Tue Apr 4 22:50:57 2023

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