Chlorine in PDB 8fux: Kpsc D160C Ternary Complex

Protein crystallography data

The structure of Kpsc D160C Ternary Complex, PDB code: 8fux was solved by M.S.Kimber, L.Doyle, C.Whitfield, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.43 / 1.20
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 58.54, 80.3, 65.98, 90, 103.04, 90
R / Rfree (%) 12.4 / 15.7

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Kpsc D160C Ternary Complex (pdb code 8fux). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Kpsc D160C Ternary Complex, PDB code: 8fux:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 8fux

Go back to Chlorine Binding Sites List in 8fux
Chlorine binding site 1 out of 2 in the Kpsc D160C Ternary Complex


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Kpsc D160C Ternary Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl406

b:18.1
occ:1.00
HD1 A:HIS171 2.6 21.9 1.0
HD2 A:PRO170 2.7 18.7 1.0
H A:HIS171 2.7 15.5 1.0
HA3 A:GLY169 2.8 14.5 1.0
O A:HOH648 3.0 15.5 1.0
ND1 A:HIS171 3.3 18.3 1.0
HB2 A:HIS171 3.4 14.8 1.0
CD A:PRO170 3.5 15.6 1.0
N A:PRO170 3.5 14.3 1.0
N A:HIS171 3.6 12.9 1.0
CA A:GLY169 3.6 12.1 1.0
C A:GLY169 3.7 13.2 1.0
HB2 A:PRO170 4.0 18.5 1.0
CB A:HIS171 4.0 12.4 1.0
CG A:HIS171 4.0 13.5 1.0
HD3 A:PRO170 4.1 18.7 1.0
N A:GLY169 4.2 11.8 1.0
HA2 A:GLY169 4.3 14.5 1.0
H A:GLY169 4.4 14.1 1.0
CA A:PRO170 4.4 14.0 1.0
CE1 A:HIS171 4.4 15.1 1.0
CG A:PRO170 4.4 17.1 1.0
CA A:HIS171 4.4 11.9 1.0
C A:PRO170 4.4 13.4 1.0
O A:GLY169 4.4 12.3 1.0
OE1 A:GLU172 4.5 13.1 1.0
HG2 A:PRO170 4.5 20.4 1.0
CB A:PRO170 4.5 15.4 1.0
HE1 A:HIS171 4.6 18.1 1.0
H A:GLU172 4.7 13.4 1.0
HB3 A:HIS171 4.9 14.8 1.0

Chlorine binding site 2 out of 2 in 8fux

Go back to Chlorine Binding Sites List in 8fux
Chlorine binding site 2 out of 2 in the Kpsc D160C Ternary Complex


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Kpsc D160C Ternary Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl405

b:23.6
occ:0.87
H B:GLN186 2.3 20.2 0.5
H B:GLN186 2.3 20.2 0.5
HA B:ASN184 2.7 13.4 1.0
HB2 B:GLN186 2.9 23.4 0.5
O B:HOH818 3.0 30.0 1.0
HD2 B:PRO185 3.1 16.9 1.0
N B:GLN186 3.1 16.8 1.0
HB2 B:GLN186 3.2 26.6 0.5
C B:ASN184 3.2 11.5 1.0
H B:ALA187 3.3 19.1 1.0
CA B:ASN184 3.3 11.2 1.0
HB2 B:ALA187 3.4 20.4 1.0
HB3 B:ASN184 3.4 15.4 1.0
N B:PRO185 3.4 13.4 1.0
O B:HOH548 3.6 28.7 1.0
N B:ALA187 3.6 15.9 1.0
HG2 B:GLN186 3.6 30.5 0.5
O B:ASN184 3.7 12.7 1.0
CB B:GLN186 3.7 19.5 0.5
CD B:PRO185 3.7 14.1 1.0
CA B:GLN186 3.7 17.8 0.5
CA B:GLN186 3.8 18.8 0.5
CB B:GLN186 3.8 22.2 0.5
CB B:ASN184 3.9 12.8 1.0
C B:GLN186 3.9 19.0 1.0
OE1 B:GLN186 4.1 19.2 0.5
CB B:ALA187 4.1 17.0 1.0
C B:PRO185 4.2 16.2 1.0
HB3 B:GLN186 4.2 23.4 0.5
CG B:GLN186 4.2 25.4 0.5
HG2 B:PRO185 4.3 20.8 1.0
HB3 B:ALA187 4.3 20.4 1.0
CA B:PRO185 4.4 15.8 1.0
CA B:ALA187 4.4 16.1 1.0
HD3 B:PRO185 4.4 16.9 1.0
CG B:PRO185 4.5 17.3 1.0
HB2 B:ASN184 4.6 15.4 1.0
HA B:ALA187 4.6 19.3 1.0
N B:ASN184 4.6 11.2 1.0
HB3 B:GLN186 4.7 26.6 0.5
CD B:GLN186 4.7 21.1 0.5
HA B:GLN186 4.7 21.4 0.5
HG3 B:GLN186 4.7 30.5 0.5
HA B:GLN186 4.7 22.5 0.5
OD1 B:ASN184 4.7 15.5 1.0
CG B:GLN186 4.8 21.0 0.5
O B:GLU183 4.8 13.6 1.0
HB2 B:ASN149 4.8 30.7 1.0
CG B:ASN184 4.8 12.5 1.0
O B:GLN186 4.9 21.5 1.0
HB1 B:ALA187 5.0 20.4 1.0

Reference:

L.Doyle, O.G.Ovchinnikova, B.Huang, T.J.B.Forrester, T.L.Lowary, M.S.Kimber, C.Whitfield. Mechanism and Linkage Specificities of the Dual Retaining Beta-Kdo Glycosyltransferase Modules of Kpsc From Bacterial Capsule Biosynthesis To Be Published.
Page generated: Tue Apr 4 22:55:33 2023

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy