Atomistry » Chlorine » PDB 8gnk-8h7x » 8gol
Atomistry »
  Chlorine »
    PDB 8gnk-8h7x »
      8gol »

Chlorine in PDB 8gol: Crystal Structure of Sule

Protein crystallography data

The structure of Crystal Structure of Sule, PDB code: 8gol was solved by B.Liu, T.Ran, W.Wang, J.He, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 49.78 / 1.60
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 55.422, 166.661, 76.965, 90, 109.74, 90
R / Rfree (%) 15.1 / 18.1

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Sule (pdb code 8gol). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the Crystal Structure of Sule, PDB code: 8gol:
Jump to Chlorine binding site number: 1; 2; 3; 4;

Chlorine binding site 1 out of 4 in 8gol

Go back to Chlorine Binding Sites List in 8gol
Chlorine binding site 1 out of 4 in the Crystal Structure of Sule


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Sule within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl401

b:61.4
occ:1.00
CL A:IJC401 0.0 61.4 1.0
C9 A:IJC401 1.8 35.9 1.0
O A:HOH863 2.7 32.9 1.0
N2 A:IJC401 2.7 35.6 1.0
C10 A:IJC401 2.8 34.7 1.0
O A:HOH879 2.9 36.4 1.0
O A:HOH589 3.1 23.3 1.0
O A:HOH576 3.6 24.5 1.0
CD A:PRO258 4.0 20.0 1.0
C8 A:IJC401 4.0 40.0 1.0
C11 A:IJC401 4.0 33.6 1.0
O A:HOH848 4.2 33.1 1.0
CG A:PHE257 4.2 16.8 1.0
CD1 A:PHE257 4.3 20.7 1.0
CB A:PHE257 4.3 13.4 1.0
N3 A:IJC401 4.5 37.0 1.0
O A:HOH840 4.7 36.7 1.0
CD2 A:PHE257 4.7 17.0 1.0
CA A:PHE257 4.8 14.6 1.0
CE1 A:PHE257 4.8 23.2 1.0
CG A:PRO258 4.9 23.1 1.0
N A:PRO258 4.9 15.8 1.0

Chlorine binding site 2 out of 4 in 8gol

Go back to Chlorine Binding Sites List in 8gol
Chlorine binding site 2 out of 4 in the Crystal Structure of Sule


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Sule within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl401

b:66.2
occ:1.00
CL B:IJC401 0.0 66.2 1.0
C9 B:IJC401 1.8 40.0 1.0
C10 B:IJC401 2.7 38.4 1.0
N2 B:IJC401 2.8 38.6 1.0
O B:HOH854 3.0 31.8 1.0
O B:HOH560 3.6 25.3 1.0
O B:HOH826 3.6 35.8 1.0
CD B:PRO258 3.7 18.9 1.0
CD1 B:PHE257 4.0 20.4 1.0
C8 B:IJC401 4.0 39.1 1.0
C11 B:IJC401 4.0 40.1 1.0
CG B:PHE257 4.2 14.4 1.0
O B:HOH555 4.3 25.6 1.0
CE1 B:PHE257 4.4 22.9 1.0
CB B:PHE257 4.5 14.7 1.0
N3 B:IJC401 4.5 36.4 1.0
CA B:PHE257 4.6 13.1 1.0
CG B:PRO258 4.6 20.8 1.0
N B:PRO258 4.8 16.9 1.0
CD2 B:PHE257 4.9 14.4 1.0

Chlorine binding site 3 out of 4 in 8gol

Go back to Chlorine Binding Sites List in 8gol
Chlorine binding site 3 out of 4 in the Crystal Structure of Sule


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of Sule within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl401

b:61.7
occ:1.00
CL C:IJC401 0.0 61.7 1.0
C9 C:IJC401 1.8 37.7 1.0
C10 C:IJC401 2.7 36.9 1.0
N2 C:IJC401 2.8 31.9 1.0
O C:HOH847 3.0 33.0 1.0
O C:HOH528 3.6 26.7 1.0
O C:HOH819 3.6 31.2 1.0
CD C:PRO258 3.9 21.4 1.0
O C:HOH608 3.9 24.0 1.0
C8 C:IJC401 4.0 38.9 1.0
CD1 C:PHE257 4.0 20.4 1.0
C11 C:IJC401 4.0 34.3 1.0
CG C:PHE257 4.2 18.3 1.0
CB C:PHE257 4.4 17.4 1.0
N3 C:IJC401 4.5 36.5 1.0
CE1 C:PHE257 4.5 21.7 1.0
CA C:PHE257 4.6 16.1 1.0
CG C:PRO258 4.7 21.1 1.0
CD2 C:PHE257 4.8 16.6 1.0
N C:PRO258 4.8 16.4 1.0

Chlorine binding site 4 out of 4 in 8gol

Go back to Chlorine Binding Sites List in 8gol
Chlorine binding site 4 out of 4 in the Crystal Structure of Sule


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of Sule within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl401

b:64.1
occ:1.00
CL D:IJC401 0.0 64.1 1.0
C9 D:IJC401 1.8 35.3 1.0
N2 D:IJC401 2.7 37.2 1.0
C10 D:IJC401 2.8 38.3 1.0
O D:HOH854 2.8 35.8 1.0
O D:HOH844 3.1 31.3 1.0
O D:HOH626 3.3 26.0 1.0
CD D:PRO258 3.7 22.3 1.0
O D:HOH583 3.9 21.6 1.0
CD1 D:PHE257 4.0 20.3 1.0
C8 D:IJC401 4.0 35.5 1.0
C11 D:IJC401 4.0 35.1 1.0
CG D:PHE257 4.1 15.5 1.0
CB D:PHE257 4.2 15.6 1.0
N3 D:IJC401 4.5 41.2 1.0
CA D:PHE257 4.5 17.5 1.0
CE1 D:PHE257 4.5 23.5 1.0
CG D:PRO258 4.6 22.3 1.0
CD2 D:PHE257 4.7 15.2 1.0
N D:PRO258 4.7 17.8 1.0

Reference:

B.Liu, W.Wang, J.Qiu, X.Huang, S.Qiu, Y.Bao, S.Xu, L.Ruan, T.Ran, J.He. Crystal Structures of Herbicide-Detoxifying Esterase Reveal A Lid Loop Affecting Substrate Binding and Activity. Nat Commun V. 14 4343 2023.
ISSN: ESSN 2041-1723
PubMed: 37468532
DOI: 10.1038/S41467-023-40103-5
Page generated: Thu Dec 28 03:14:44 2023

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy