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Chlorine in PDB 8h8p: Crystal Structure of Thiomorpholine-Carboxylate Dehydrogenase From Candida Parapsilosis.

Protein crystallography data

The structure of Crystal Structure of Thiomorpholine-Carboxylate Dehydrogenase From Candida Parapsilosis., PDB code: 8h8p was solved by M.V.N.Uma Mahesh, S.Abhishek, M.A.Faidh, E.Rajakumara, A.Chadha, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 22.84 / 2.50
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 84.755, 92.553, 169.864, 90, 90, 90
R / Rfree (%) 21.9 / 24.5

Other elements in 8h8p:

The structure of Crystal Structure of Thiomorpholine-Carboxylate Dehydrogenase From Candida Parapsilosis. also contains other interesting chemical elements:

Magnesium (Mg) 2 atoms
Sodium (Na) 4 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Thiomorpholine-Carboxylate Dehydrogenase From Candida Parapsilosis. (pdb code 8h8p). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the Crystal Structure of Thiomorpholine-Carboxylate Dehydrogenase From Candida Parapsilosis., PDB code: 8h8p:
Jump to Chlorine binding site number: 1; 2; 3; 4;

Chlorine binding site 1 out of 4 in 8h8p

Go back to Chlorine Binding Sites List in 8h8p
Chlorine binding site 1 out of 4 in the Crystal Structure of Thiomorpholine-Carboxylate Dehydrogenase From Candida Parapsilosis.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Thiomorpholine-Carboxylate Dehydrogenase From Candida Parapsilosis. within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl409

b:82.5
occ:1.00
NH2 B:ARG48 4.0 71.5 1.0
CD B:LYS249 4.4 61.3 1.0
CZ B:PHE91 4.6 73.6 1.0
CG2 B:VAL63 4.7 48.2 1.0
CE1 B:TYR248 5.0 61.6 1.0

Chlorine binding site 2 out of 4 in 8h8p

Go back to Chlorine Binding Sites List in 8h8p
Chlorine binding site 2 out of 4 in the Crystal Structure of Thiomorpholine-Carboxylate Dehydrogenase From Candida Parapsilosis.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Thiomorpholine-Carboxylate Dehydrogenase From Candida Parapsilosis. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl407

b:90.0
occ:1.00
NH2 A:ARG48 4.1 65.9 1.0
CG2 A:VAL63 4.9 59.7 1.0

Chlorine binding site 3 out of 4 in 8h8p

Go back to Chlorine Binding Sites List in 8h8p
Chlorine binding site 3 out of 4 in the Crystal Structure of Thiomorpholine-Carboxylate Dehydrogenase From Candida Parapsilosis.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of Thiomorpholine-Carboxylate Dehydrogenase From Candida Parapsilosis. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl408

b:80.6
occ:1.00
CG2 A:VAL50 4.2 56.5 1.0
NE A:ARG48 4.4 70.0 1.0
NH2 A:ARG48 4.6 65.9 1.0
CG1 A:VAL50 4.7 54.4 1.0
CZ A:ARG48 4.7 73.8 1.0
CG A:ARG48 5.0 53.4 1.0

Chlorine binding site 4 out of 4 in 8h8p

Go back to Chlorine Binding Sites List in 8h8p
Chlorine binding site 4 out of 4 in the Crystal Structure of Thiomorpholine-Carboxylate Dehydrogenase From Candida Parapsilosis.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of Thiomorpholine-Carboxylate Dehydrogenase From Candida Parapsilosis. within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl408

b:72.3
occ:1.00
NH1 C:ARG5 3.9 79.0 1.0
NH2 C:ARG5 4.2 83.5 1.0
CZ C:ARG5 4.5 75.1 1.0

Reference:

M.V.N.Uma Mahesh, S.Abhishek, M.A.Faidh, E.Rajakumara, A.Chadha. Structure and Mechanism of A Ornithine Cyclodeaminase/Mu-Crystallin Homolog Purified From Candida Parapsilosis Atcc 7330. To Be Published.
Page generated: Thu Dec 28 03:17:12 2023

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