Chlorine in PDB 8ihs: Cryo-Em Structure of Ochratoxin A-Detoxifying Amidohydrolase ADH3 in Complex with Ochratoxin A
Other elements in 8ihs:
The structure of Cryo-Em Structure of Ochratoxin A-Detoxifying Amidohydrolase ADH3 in Complex with Ochratoxin A also contains other interesting chemical elements:
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Cryo-Em Structure of Ochratoxin A-Detoxifying Amidohydrolase ADH3 in Complex with Ochratoxin A
(pdb code 8ihs). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 8 binding sites of Chlorine where determined in the
Cryo-Em Structure of Ochratoxin A-Detoxifying Amidohydrolase ADH3 in Complex with Ochratoxin A, PDB code: 8ihs:
Jump to Chlorine binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
Chlorine binding site 1 out
of 8 in 8ihs
Go back to
Chlorine Binding Sites List in 8ihs
Chlorine binding site 1 out
of 8 in the Cryo-Em Structure of Ochratoxin A-Detoxifying Amidohydrolase ADH3 in Complex with Ochratoxin A
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Cryo-Em Structure of Ochratoxin A-Detoxifying Amidohydrolase ADH3 in Complex with Ochratoxin A within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl503
b:75.2
occ:1.00
|
CLA
|
A:97U503
|
0.0
|
75.2
|
1.0
|
CAC
|
A:97U503
|
1.7
|
56.3
|
1.0
|
CAB
|
A:97U503
|
2.7
|
52.7
|
1.0
|
CAD
|
A:97U503
|
2.7
|
51.3
|
1.0
|
CAG
|
A:97U503
|
2.9
|
50.9
|
1.0
|
OG
|
A:SER156
|
3.5
|
44.0
|
1.0
|
OQ1
|
A:KCX210
|
3.8
|
35.4
|
1.0
|
O
|
A:LEU128
|
3.9
|
42.0
|
1.0
|
CAA
|
A:97U503
|
4.0
|
51.1
|
1.0
|
CAE
|
A:97U503
|
4.0
|
45.8
|
1.0
|
CX
|
A:KCX210
|
4.2
|
37.7
|
1.0
|
CE1
|
A:HIS85
|
4.2
|
26.0
|
1.0
|
CE
|
A:KCX210
|
4.4
|
30.3
|
1.0
|
CB
|
A:SER156
|
4.4
|
32.6
|
1.0
|
CAH
|
A:97U503
|
4.4
|
59.3
|
1.0
|
CAF
|
A:97U503
|
4.5
|
45.8
|
1.0
|
NZ
|
A:KCX210
|
4.5
|
39.5
|
1.0
|
CA
|
A:GLY129
|
4.7
|
28.0
|
1.0
|
ZN
|
A:ZN501
|
4.8
|
66.3
|
1.0
|
NE2
|
A:HIS85
|
4.8
|
28.8
|
1.0
|
OQ2
|
A:KCX210
|
4.9
|
37.8
|
1.0
|
|
Chlorine binding site 2 out
of 8 in 8ihs
Go back to
Chlorine Binding Sites List in 8ihs
Chlorine binding site 2 out
of 8 in the Cryo-Em Structure of Ochratoxin A-Detoxifying Amidohydrolase ADH3 in Complex with Ochratoxin A
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Cryo-Em Structure of Ochratoxin A-Detoxifying Amidohydrolase ADH3 in Complex with Ochratoxin A within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl503
b:75.2
occ:1.00
|
CLA
|
B:97U503
|
0.0
|
75.2
|
1.0
|
CAC
|
B:97U503
|
1.7
|
56.3
|
1.0
|
CAD
|
B:97U503
|
2.7
|
51.3
|
1.0
|
CAB
|
B:97U503
|
2.7
|
52.7
|
1.0
|
CAG
|
B:97U503
|
2.9
|
50.9
|
1.0
|
OG
|
B:SER156
|
3.5
|
44.0
|
1.0
|
OQ1
|
B:KCX210
|
3.8
|
35.4
|
1.0
|
O
|
B:LEU128
|
4.0
|
42.0
|
1.0
|
CAE
|
B:97U503
|
4.0
|
45.8
|
1.0
|
CAA
|
B:97U503
|
4.0
|
51.1
|
1.0
|
CX
|
B:KCX210
|
4.2
|
37.7
|
1.0
|
CE1
|
B:HIS85
|
4.3
|
26.0
|
1.0
|
CB
|
B:SER156
|
4.4
|
32.6
|
1.0
|
CE
|
B:KCX210
|
4.4
|
30.3
|
1.0
|
CAH
|
B:97U503
|
4.4
|
59.3
|
1.0
|
CAF
|
B:97U503
|
4.5
|
45.8
|
1.0
|
NZ
|
B:KCX210
|
4.5
|
39.5
|
1.0
|
CA
|
B:GLY129
|
4.7
|
28.0
|
1.0
|
ZN
|
B:ZN501
|
4.9
|
66.3
|
1.0
|
NE2
|
B:HIS85
|
4.9
|
28.8
|
1.0
|
OQ2
|
B:KCX210
|
4.9
|
37.8
|
1.0
|
CB
|
B:ALA164
|
5.0
|
37.4
|
1.0
|
|
Chlorine binding site 3 out
of 8 in 8ihs
Go back to
Chlorine Binding Sites List in 8ihs
Chlorine binding site 3 out
of 8 in the Cryo-Em Structure of Ochratoxin A-Detoxifying Amidohydrolase ADH3 in Complex with Ochratoxin A
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of Cryo-Em Structure of Ochratoxin A-Detoxifying Amidohydrolase ADH3 in Complex with Ochratoxin A within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Cl503
b:75.2
occ:1.00
|
CLA
|
C:97U503
|
0.0
|
75.2
|
1.0
|
CAC
|
C:97U503
|
1.7
|
56.3
|
1.0
|
CAD
|
C:97U503
|
2.7
|
51.3
|
1.0
|
CAB
|
C:97U503
|
2.7
|
52.7
|
1.0
|
CAG
|
C:97U503
|
2.9
|
50.9
|
1.0
|
OG
|
C:SER156
|
3.5
|
44.0
|
1.0
|
OQ1
|
C:KCX210
|
3.8
|
35.4
|
1.0
|
O
|
C:LEU128
|
4.0
|
42.0
|
1.0
|
CAE
|
C:97U503
|
4.0
|
45.8
|
1.0
|
CAA
|
C:97U503
|
4.0
|
51.1
|
1.0
|
CE1
|
C:HIS85
|
4.2
|
26.0
|
1.0
|
CX
|
C:KCX210
|
4.3
|
37.7
|
1.0
|
CB
|
C:SER156
|
4.4
|
32.6
|
1.0
|
CAH
|
C:97U503
|
4.4
|
59.3
|
1.0
|
CE
|
C:KCX210
|
4.5
|
30.3
|
1.0
|
CAF
|
C:97U503
|
4.5
|
45.8
|
1.0
|
NZ
|
C:KCX210
|
4.6
|
39.5
|
1.0
|
CA
|
C:GLY129
|
4.7
|
28.0
|
1.0
|
NE2
|
C:HIS85
|
4.9
|
28.8
|
1.0
|
ZN
|
C:ZN501
|
4.9
|
66.3
|
1.0
|
OQ2
|
C:KCX210
|
4.9
|
37.8
|
1.0
|
|
Chlorine binding site 4 out
of 8 in 8ihs
Go back to
Chlorine Binding Sites List in 8ihs
Chlorine binding site 4 out
of 8 in the Cryo-Em Structure of Ochratoxin A-Detoxifying Amidohydrolase ADH3 in Complex with Ochratoxin A
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 4 of Cryo-Em Structure of Ochratoxin A-Detoxifying Amidohydrolase ADH3 in Complex with Ochratoxin A within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Cl503
b:75.2
occ:1.00
|
CLA
|
D:97U503
|
0.0
|
75.2
|
1.0
|
CAC
|
D:97U503
|
1.7
|
56.3
|
1.0
|
CAD
|
D:97U503
|
2.7
|
51.3
|
1.0
|
CAB
|
D:97U503
|
2.7
|
52.7
|
1.0
|
CAG
|
D:97U503
|
2.9
|
50.9
|
1.0
|
OG
|
D:SER156
|
3.5
|
44.0
|
1.0
|
OQ1
|
D:KCX210
|
3.8
|
35.4
|
1.0
|
O
|
D:LEU128
|
4.0
|
42.0
|
1.0
|
CAE
|
D:97U503
|
4.0
|
45.8
|
1.0
|
CAA
|
D:97U503
|
4.0
|
51.1
|
1.0
|
CE1
|
D:HIS85
|
4.2
|
26.0
|
1.0
|
CX
|
D:KCX210
|
4.3
|
37.7
|
1.0
|
CB
|
D:SER156
|
4.4
|
32.6
|
1.0
|
CAH
|
D:97U503
|
4.4
|
59.3
|
1.0
|
CE
|
D:KCX210
|
4.5
|
30.3
|
1.0
|
CAF
|
D:97U503
|
4.5
|
45.8
|
1.0
|
NZ
|
D:KCX210
|
4.6
|
39.5
|
1.0
|
CA
|
D:GLY129
|
4.7
|
28.0
|
1.0
|
NE2
|
D:HIS85
|
4.9
|
28.8
|
1.0
|
ZN
|
D:ZN501
|
4.9
|
66.3
|
1.0
|
OQ2
|
D:KCX210
|
5.0
|
37.8
|
1.0
|
|
Chlorine binding site 5 out
of 8 in 8ihs
Go back to
Chlorine Binding Sites List in 8ihs
Chlorine binding site 5 out
of 8 in the Cryo-Em Structure of Ochratoxin A-Detoxifying Amidohydrolase ADH3 in Complex with Ochratoxin A
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 5 of Cryo-Em Structure of Ochratoxin A-Detoxifying Amidohydrolase ADH3 in Complex with Ochratoxin A within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Cl503
b:75.2
occ:1.00
|
CLA
|
E:97U503
|
0.0
|
75.2
|
1.0
|
CAC
|
E:97U503
|
1.7
|
56.3
|
1.0
|
CAD
|
E:97U503
|
2.7
|
51.3
|
1.0
|
CAB
|
E:97U503
|
2.7
|
52.7
|
1.0
|
CAG
|
E:97U503
|
2.9
|
50.9
|
1.0
|
OG
|
E:SER156
|
3.6
|
44.0
|
1.0
|
OQ2
|
E:KCX210
|
4.0
|
35.4
|
1.0
|
CAE
|
E:97U503
|
4.0
|
45.8
|
1.0
|
CAA
|
E:97U503
|
4.0
|
51.1
|
1.0
|
O
|
E:LEU128
|
4.1
|
42.0
|
1.0
|
CE1
|
E:HIS85
|
4.3
|
26.0
|
1.0
|
CAH
|
E:97U503
|
4.4
|
59.3
|
1.0
|
CX
|
E:KCX210
|
4.4
|
37.7
|
1.0
|
CAF
|
E:97U503
|
4.5
|
45.8
|
1.0
|
CB
|
E:SER156
|
4.5
|
32.6
|
1.0
|
CE
|
E:KCX210
|
4.6
|
30.3
|
1.0
|
CA
|
E:GLY129
|
4.7
|
28.0
|
1.0
|
NZ
|
E:KCX210
|
4.8
|
39.5
|
1.0
|
NE2
|
E:HIS85
|
4.9
|
28.8
|
1.0
|
ZN
|
E:ZN501
|
5.0
|
66.3
|
1.0
|
CB
|
E:ALA164
|
5.0
|
37.4
|
1.0
|
|
Chlorine binding site 6 out
of 8 in 8ihs
Go back to
Chlorine Binding Sites List in 8ihs
Chlorine binding site 6 out
of 8 in the Cryo-Em Structure of Ochratoxin A-Detoxifying Amidohydrolase ADH3 in Complex with Ochratoxin A
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 6 of Cryo-Em Structure of Ochratoxin A-Detoxifying Amidohydrolase ADH3 in Complex with Ochratoxin A within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
F:Cl503
b:75.2
occ:1.00
|
CLA
|
F:97U503
|
0.0
|
75.2
|
1.0
|
CAC
|
F:97U503
|
1.7
|
56.3
|
1.0
|
CAD
|
F:97U503
|
2.7
|
51.3
|
1.0
|
CAB
|
F:97U503
|
2.7
|
52.7
|
1.0
|
CAG
|
F:97U503
|
2.9
|
50.9
|
1.0
|
OG
|
F:SER156
|
3.7
|
44.0
|
1.0
|
CAE
|
F:97U503
|
4.0
|
45.8
|
1.0
|
CAA
|
F:97U503
|
4.0
|
51.1
|
1.0
|
OQ2
|
F:KCX210
|
4.0
|
35.4
|
1.0
|
O
|
F:LEU128
|
4.2
|
42.0
|
1.0
|
CE1
|
F:HIS85
|
4.3
|
26.0
|
1.0
|
CAH
|
F:97U503
|
4.4
|
59.3
|
1.0
|
CAF
|
F:97U503
|
4.5
|
45.8
|
1.0
|
CX
|
F:KCX210
|
4.5
|
37.7
|
1.0
|
CB
|
F:SER156
|
4.5
|
32.6
|
1.0
|
CE
|
F:KCX210
|
4.7
|
30.3
|
1.0
|
CA
|
F:GLY129
|
4.8
|
28.0
|
1.0
|
NZ
|
F:KCX210
|
4.8
|
39.5
|
1.0
|
NE2
|
F:HIS85
|
4.9
|
28.8
|
1.0
|
ZN
|
F:ZN501
|
5.0
|
66.3
|
1.0
|
|
Chlorine binding site 7 out
of 8 in 8ihs
Go back to
Chlorine Binding Sites List in 8ihs
Chlorine binding site 7 out
of 8 in the Cryo-Em Structure of Ochratoxin A-Detoxifying Amidohydrolase ADH3 in Complex with Ochratoxin A
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 7 of Cryo-Em Structure of Ochratoxin A-Detoxifying Amidohydrolase ADH3 in Complex with Ochratoxin A within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
G:Cl503
b:75.2
occ:1.00
|
CLA
|
G:97U503
|
0.0
|
75.2
|
1.0
|
CAC
|
G:97U503
|
1.7
|
56.3
|
1.0
|
CAD
|
G:97U503
|
2.7
|
51.3
|
1.0
|
CAB
|
G:97U503
|
2.7
|
52.7
|
1.0
|
CAG
|
G:97U503
|
2.9
|
50.9
|
1.0
|
OG
|
G:SER156
|
3.6
|
44.0
|
1.0
|
OQ2
|
G:KCX210
|
4.0
|
35.4
|
1.0
|
CAE
|
G:97U503
|
4.0
|
45.8
|
1.0
|
CAA
|
G:97U503
|
4.0
|
51.1
|
1.0
|
O
|
G:LEU128
|
4.1
|
42.0
|
1.0
|
CE1
|
G:HIS85
|
4.3
|
26.0
|
1.0
|
CAH
|
G:97U503
|
4.4
|
59.3
|
1.0
|
CX
|
G:KCX210
|
4.4
|
37.7
|
1.0
|
CAF
|
G:97U503
|
4.5
|
45.8
|
1.0
|
CB
|
G:SER156
|
4.5
|
32.6
|
1.0
|
CE
|
G:KCX210
|
4.7
|
30.3
|
1.0
|
NZ
|
G:KCX210
|
4.8
|
39.5
|
1.0
|
CA
|
G:GLY129
|
4.8
|
28.0
|
1.0
|
NE2
|
G:HIS85
|
4.9
|
28.8
|
1.0
|
ZN
|
G:ZN501
|
5.0
|
66.3
|
1.0
|
CB
|
G:ALA164
|
5.0
|
37.4
|
1.0
|
|
Chlorine binding site 8 out
of 8 in 8ihs
Go back to
Chlorine Binding Sites List in 8ihs
Chlorine binding site 8 out
of 8 in the Cryo-Em Structure of Ochratoxin A-Detoxifying Amidohydrolase ADH3 in Complex with Ochratoxin A
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 8 of Cryo-Em Structure of Ochratoxin A-Detoxifying Amidohydrolase ADH3 in Complex with Ochratoxin A within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
H:Cl503
b:75.2
occ:1.00
|
CLA
|
H:97U503
|
0.0
|
75.2
|
1.0
|
CAC
|
H:97U503
|
1.7
|
56.3
|
1.0
|
CAD
|
H:97U503
|
2.7
|
51.3
|
1.0
|
CAB
|
H:97U503
|
2.7
|
52.7
|
1.0
|
CAG
|
H:97U503
|
2.9
|
50.9
|
1.0
|
OG
|
H:SER156
|
3.6
|
44.0
|
1.0
|
OQ2
|
H:KCX210
|
4.0
|
35.4
|
1.0
|
CAE
|
H:97U503
|
4.0
|
45.8
|
1.0
|
CAA
|
H:97U503
|
4.0
|
51.1
|
1.0
|
O
|
H:LEU128
|
4.1
|
42.0
|
1.0
|
CE1
|
H:HIS85
|
4.3
|
26.0
|
1.0
|
CAH
|
H:97U503
|
4.4
|
59.3
|
1.0
|
CX
|
H:KCX210
|
4.4
|
37.7
|
1.0
|
CAF
|
H:97U503
|
4.5
|
45.8
|
1.0
|
CB
|
H:SER156
|
4.5
|
32.6
|
1.0
|
CE
|
H:KCX210
|
4.7
|
30.3
|
1.0
|
CA
|
H:GLY129
|
4.8
|
28.0
|
1.0
|
NZ
|
H:KCX210
|
4.8
|
39.5
|
1.0
|
NE2
|
H:HIS85
|
4.9
|
28.8
|
1.0
|
ZN
|
H:ZN501
|
5.0
|
66.3
|
1.0
|
CB
|
H:ALA164
|
5.0
|
37.4
|
1.0
|
|
Reference:
L.Dai,
D.Niu,
J.W.Huang,
X.Li,
P.Shen,
H.Li,
Z.Xie,
J.Min,
Y.Hu,
Y.Yang,
R.T.Guo,
C.C.Chen.
Cryo-Em Structure and Rational Engineering of A Superefficient Ochratoxin A-Detoxifying Amidohydrolase. J Hazard Mater V. 458 31836 2023.
ISSN: ESSN 1873-3336
PubMed: 37331057
DOI: 10.1016/J.JHAZMAT.2023.131836
Page generated: Tue Jul 30 10:30:58 2024
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