Chlorine in PDB 8it6: Phosphoglycerate Mutase 1 Complexed with A Compound

Enzymatic activity of Phosphoglycerate Mutase 1 Complexed with A Compound

All present enzymatic activity of Phosphoglycerate Mutase 1 Complexed with A Compound:
5.4.2.11; 5.4.2.4;

Protein crystallography data

The structure of Phosphoglycerate Mutase 1 Complexed with A Compound, PDB code: 8it6 was solved by L.Zhou, L.L.Jiang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.01 / 2.55
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 82.545, 88.584, 95.68, 90, 90, 90
R / Rfree (%) 19.3 / 26.7

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Phosphoglycerate Mutase 1 Complexed with A Compound (pdb code 8it6). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Phosphoglycerate Mutase 1 Complexed with A Compound, PDB code: 8it6:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 8it6

Go back to Chlorine Binding Sites List in 8it6
Chlorine binding site 1 out of 2 in the Phosphoglycerate Mutase 1 Complexed with A Compound


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Phosphoglycerate Mutase 1 Complexed with A Compound within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl301

b:41.6
occ:1.00
NH2 B:ARG83 3.1 32.1 1.0
NH1 C:ARG83 3.2 32.6 1.0
NE1 B:TRP68 3.4 30.1 1.0
NH1 B:ARG83 3.4 30.7 1.0
NE1 C:TRP68 3.5 29.3 1.0
NH2 C:ARG83 3.5 35.1 1.0
CZ B:ARG83 3.7 32.4 1.0
CZ C:ARG83 3.8 34.7 1.0
CG2 B:VAL81 4.0 33.2 1.0
CG2 C:VAL81 4.2 26.9 1.0
CB B:VAL81 4.2 31.1 1.0
CB C:VAL81 4.2 29.9 1.0
CE2 B:TRP68 4.2 30.1 1.0
CD1 B:TRP68 4.3 31.4 1.0
CD1 C:TRP68 4.3 28.3 1.0
CE2 C:TRP68 4.4 28.5 1.0
CG1 C:VAL81 4.4 31.1 1.0
CZ2 B:TRP68 4.5 28.7 1.0
CG1 B:VAL81 4.6 28.8 1.0
CZ2 C:TRP68 4.6 30.4 1.0

Chlorine binding site 2 out of 2 in 8it6

Go back to Chlorine Binding Sites List in 8it6
Chlorine binding site 2 out of 2 in the Phosphoglycerate Mutase 1 Complexed with A Compound


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Phosphoglycerate Mutase 1 Complexed with A Compound within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl301

b:57.7
occ:1.00
CL01 C:Q90301 0.0 57.7 1.0
C02 C:Q90301 1.8 52.1 1.0
C37 C:Q90301 2.6 46.7 1.0
H371 C:Q90301 2.7 56.0 1.0
C03 C:Q90301 2.8 54.5 1.0
H031 C:Q90301 3.0 65.4 1.0
O C:HOH421 3.6 42.1 1.0
CD1 C:TYR92 3.7 36.4 1.0
NH1 C:ARG90 3.8 39.9 1.0
CE1 C:TYR92 3.9 36.3 1.0
CG C:PRO123 3.9 40.7 1.0
C36 C:Q90301 3.9 50.8 1.0
CB C:TRP115 3.9 43.3 1.0
CB C:PRO123 3.9 39.6 1.0
C04 C:Q90301 4.1 66.8 1.0
CD1 C:LEU95 4.2 32.5 1.0
CZ C:ARG90 4.2 40.0 1.0
CD C:PRO123 4.3 39.6 1.0
CG C:TRP115 4.4 44.4 1.0
C10 C:Q90301 4.5 54.8 1.0
O C:TRP115 4.6 49.4 1.0
NH2 C:ARG90 4.6 46.5 1.0
H361 C:Q90301 4.7 61.0 1.0
C C:TRP115 4.8 48.1 1.0
NE C:ARG90 4.8 47.3 1.0
CA C:TRP115 4.8 45.6 1.0
N C:PRO123 4.9 43.9 1.0
CD2 C:TRP115 4.9 44.2 1.0
CA C:PRO123 5.0 37.1 1.0
CD C:ARG90 5.0 44.3 1.0

Reference:

L.Zhou, L.L.Jiang. Phosphoglycerate Mutase 1 Complexed with A Compound To Be Published.
Page generated: Tue Jul 30 10:46:39 2024

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