Chlorine in PDB 8pa8: Crystal Structure of the Metallo-Beta-Lactamase VIM1 with 2551

Protein crystallography data

The structure of Crystal Structure of the Metallo-Beta-Lactamase VIM1 with 2551, PDB code: 8pa8 was solved by K.Calvopina, J.Brem, A.J.M.Farley, M.D.Allen, C.J.Schofield, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.19 / 1.32
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 39.38, 67.74, 40.27, 90, 93.56, 90
R / Rfree (%) 14.2 / 16.8

Other elements in 8pa8:

The structure of Crystal Structure of the Metallo-Beta-Lactamase VIM1 with 2551 also contains other interesting chemical elements:

Zinc (Zn) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of the Metallo-Beta-Lactamase VIM1 with 2551 (pdb code 8pa8). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of the Metallo-Beta-Lactamase VIM1 with 2551, PDB code: 8pa8:

Chlorine binding site 1 out of 1 in 8pa8

Go back to Chlorine Binding Sites List in 8pa8
Chlorine binding site 1 out of 1 in the Crystal Structure of the Metallo-Beta-Lactamase VIM1 with 2551


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the Metallo-Beta-Lactamase VIM1 with 2551 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl303

b:21.9
occ:0.78
CL19 A:XLZ303 0.0 21.9 0.8
C18 A:XLZ303 1.8 20.2 0.8
H131 A:XLZ303 2.6 27.4 0.8
C12 A:XLZ303 2.7 21.0 0.8
C20 A:XLZ303 2.7 18.6 0.8
H201 A:XLZ303 2.9 22.4 0.8
C13 A:XLZ303 3.1 22.9 0.8
HE1 A:TYR67 3.1 18.6 1.0
O16 A:XLZ303 3.4 25.1 0.8
O A:HOH602 3.4 37.4 0.7
HA2 A:GLY209 3.4 29.6 1.0
S14 A:XLZ303 3.8 24.7 0.8
CE1 A:TYR67 4.0 15.5 1.0
C11 A:XLZ303 4.0 20.5 0.8
C09 A:XLZ303 4.0 17.4 0.8
H132 A:XLZ303 4.0 27.4 0.8
O A:HOH622 4.2 44.9 1.0
CA A:GLY209 4.3 24.7 1.0
O A:HOH473 4.4 29.1 0.8
C10 A:XLZ303 4.5 18.5 0.8
HD1 A:TYR67 4.6 17.1 1.0
H061 A:XLZ303 4.6 18.6 0.8
C A:GLY209 4.7 24.1 1.0
OH A:TYR67 4.7 17.0 1.0
CD1 A:TYR67 4.7 14.2 1.0
O17 A:XLZ303 4.8 25.0 0.8
HG A:SER207 4.8 38.8 1.0
O A:HOH674 4.8 25.6 0.7
CZ A:TYR67 4.8 14.8 1.0
HA3 A:GLY209 4.8 29.6 1.0
H111 A:XLZ303 4.9 24.6 0.8
H A:GLY209 4.9 30.6 1.0
H152 A:XLZ303 5.0 28.9 0.8

Reference:

K.Calvopina, J.Brem, A.J.M.Farley, M.D.Allen, C.J.Schofield. Crystal Structure of the Metallo-Beta-Lactamase VIM1 with 2551 To Be Published.
Page generated: Tue Jul 30 11:30:18 2024

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