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Chlorine in PDB 8pnj: Chorismate Mutase

Protein crystallography data

The structure of Chorismate Mutase, PDB code: 8pnj was solved by T.Khatanbaatar, G.Cordara, U.Krengel, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 46.34 / 2.36
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 48.608, 105.344, 55.776, 90, 112.48, 90
R / Rfree (%) 21.5 / 28.4

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Chorismate Mutase (pdb code 8pnj). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Chorismate Mutase, PDB code: 8pnj:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 8pnj

Go back to Chlorine Binding Sites List in 8pnj
Chlorine binding site 1 out of 2 in the Chorismate Mutase


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Chorismate Mutase within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl506

b:38.0
occ:1.00
NE2 A:HIS276 3.1 31.8 1.0
N A:ILE352 3.3 29.1 1.0
N A:SER351 3.3 23.9 1.0
N A:GLY279 3.5 33.4 1.0
CG2 A:ILE352 3.5 29.9 1.0
CA A:GLY278 3.6 30.1 1.0
CB A:ASP350 3.7 27.6 1.0
O A:GLY279 3.8 27.9 1.0
CD2 A:HIS276 3.9 31.7 1.0
C A:ASP350 4.0 25.9 1.0
CA A:SER351 4.0 27.3 1.0
CB A:ILE352 4.0 30.8 1.0
CB A:SER351 4.1 27.9 1.0
CA A:ASP350 4.1 27.7 1.0
C A:GLY278 4.1 30.0 1.0
C A:SER351 4.1 28.2 1.0
CE1 A:HIS276 4.2 33.3 1.0
CA A:ILE352 4.3 31.7 1.0
N A:GLY278 4.4 29.8 1.0
CG A:ASP350 4.5 29.2 1.0
C A:GLY279 4.6 30.0 1.0
CA A:GLY279 4.6 33.5 1.0
C2 A:PEG503 4.7 54.6 1.0
OG A:SER351 4.8 29.8 1.0
O A:ASP350 4.9 23.4 1.0
O2 A:PEG503 4.9 53.8 1.0

Chlorine binding site 2 out of 2 in 8pnj

Go back to Chlorine Binding Sites List in 8pnj
Chlorine binding site 2 out of 2 in the Chorismate Mutase


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Chorismate Mutase within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl507

b:48.5
occ:1.00
OG1 A:THR312 3.0 28.4 1.0
NH2 A:ARG265 3.4 33.9 1.0
CZ3 A:TRP240 3.5 39.5 1.0
NH1 A:ARG265 3.6 35.5 1.0
OG A:SER260 3.7 23.9 0.8
O A:HOH627 3.7 20.8 1.0
N A:THR312 3.8 31.4 1.0
CE3 A:TRP240 3.9 36.1 1.0
CZ A:ARG265 4.0 37.1 1.0
CH2 A:TRP240 4.0 40.5 1.0
N A:SER260 4.0 25.3 0.2
N A:SER260 4.0 24.8 0.8
CB A:SER260 4.0 24.7 0.2
CB A:THR312 4.0 28.9 1.0
CG2 A:THR312 4.1 30.9 1.0
CB A:SER260 4.1 24.2 0.8
NZ A:LYS377 4.2 33.5 1.0
O A:GLY258 4.3 30.3 1.0
CA A:THR312 4.5 30.1 1.0
CA A:GLY311 4.6 30.2 1.0
CD2 A:TRP240 4.6 37.8 1.0
C A:GLY311 4.7 30.9 1.0
CA A:SER260 4.7 24.9 0.2
CA A:SER260 4.7 23.6 0.8
CZ2 A:TRP240 4.7 38.1 1.0
CA A:ILE259 4.8 26.3 1.0
CE2 A:TRP240 4.9 38.0 1.0
C A:ILE259 5.0 26.5 1.0

Reference:

T.Khatanbaatar, G.Cordara, U.Krengel. Structural Analysis of Chorismate Mutase and Cyclohexadienyl Dehydratase From Pseudomonas Aeruginosa To Be Published.
Page generated: Tue Jul 30 11:38:00 2024

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