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Chlorine in PDB 3w2o: Egfr Kinase Domain T790M/L858R Mutant with Tak-285

Enzymatic activity of Egfr Kinase Domain T790M/L858R Mutant with Tak-285

All present enzymatic activity of Egfr Kinase Domain T790M/L858R Mutant with Tak-285:
2.7.10.1;

Protein crystallography data

The structure of Egfr Kinase Domain T790M/L858R Mutant with Tak-285, PDB code: 3w2o was solved by S.Sogabe, Y.Kawakita, S.Igaki, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.00 / 2.35
Space group I 2 3
Cell size a, b, c (Å), α, β, γ (°) 143.953, 143.953, 143.953, 90.00, 90.00, 90.00
R / Rfree (%) 18 / 21.6

Other elements in 3w2o:

The structure of Egfr Kinase Domain T790M/L858R Mutant with Tak-285 also contains other interesting chemical elements:

Fluorine (F) 3 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Egfr Kinase Domain T790M/L858R Mutant with Tak-285 (pdb code 3w2o). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Egfr Kinase Domain T790M/L858R Mutant with Tak-285, PDB code: 3w2o:

Chlorine binding site 1 out of 1 in 3w2o

Go back to Chlorine Binding Sites List in 3w2o
Chlorine binding site 1 out of 1 in the Egfr Kinase Domain T790M/L858R Mutant with Tak-285


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Egfr Kinase Domain T790M/L858R Mutant with Tak-285 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1101

b:51.5
occ:1.00
CL A:03P1101 0.0 51.5 1.0
C12 A:03P1101 1.8 52.4 1.0
C13 A:03P1101 2.8 55.1 1.0
C11 A:03P1101 2.8 49.4 1.0
O1 A:03P1101 2.9 56.8 1.0
O A:LEU788 3.2 43.1 1.0
O A:ALA743 3.4 39.3 1.0
N A:LYS745 3.5 48.5 1.0
CG A:MET790 3.6 44.4 1.0
C A:ALA743 3.8 40.4 1.0
CB A:LYS745 3.8 52.3 1.0
CB A:MET790 3.9 39.6 1.0
C A:LEU788 3.9 41.9 1.0
N A:MET790 4.0 37.0 1.0
C A:ILE744 4.1 45.2 1.0
C14 A:03P1101 4.1 52.1 1.0
N A:ILE744 4.1 41.7 1.0
CA A:ILE744 4.1 42.8 1.0
SD A:MET790 4.1 49.1 1.0
C10 A:03P1101 4.1 49.7 1.0
CA A:LYS745 4.2 50.7 1.0
C16 A:03P1101 4.3 62.8 1.0
CB A:LEU788 4.3 45.8 1.0
CB A:ALA743 4.4 37.1 1.0
N A:ILE789 4.5 38.7 1.0
CA A:ILE789 4.5 38.0 1.0
C A:ILE789 4.5 39.5 1.0
CA A:MET790 4.6 38.8 1.0
C15 A:03P1101 4.6 48.7 1.0
CA A:ALA743 4.7 39.2 1.0
CA A:LEU788 4.8 43.6 1.0
O A:HOH2007 4.9 42.0 1.0

Reference:

S.Sogabe, Y.Kawakita, S.Igaki, H.Iwata, H.Miki, D.R.Cary, T.Takagi, S.Takagi, Y.Ohta, T.Ishikawa. Structure-Based Approach For the Discovery of Pyrrolo[3,2-D]Pyrimidine-Based Egfr T790M/L858R Mutant Inhibitors. Acs Med.Chem.Lett. V. 4 201 2013.
ISSN: ISSN 1948-5875
PubMed: 24900643
DOI: 10.1021/ML300327Z
Page generated: Fri Jul 11 11:53:25 2025

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