Chlorine in PDB 8qa8: Crystal Structure of the C-Terminally Truncated Transcriptional Repressor Protein Korb From the RK2 Plasmid Complexed with Ctp-Gamma- S
Protein crystallography data
The structure of Crystal Structure of the C-Terminally Truncated Transcriptional Repressor Protein Korb From the RK2 Plasmid Complexed with Ctp-Gamma- S, PDB code: 8qa8
was solved by
T.C.Mclean,
J.E.A.Mundy,
D.M.Lawson,
T.B.K.Le,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
121.28 /
2.30
|
Space group
|
P 21 21 21
|
Cell size a, b, c (Å), α, β, γ (°)
|
58.686,
152.71,
198.274,
90,
90,
90
|
R / Rfree (%)
|
22.7 /
25.6
|
Chlorine Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
20;
Page 3, Binding sites: 21 -
22;
Binding sites:
The binding sites of Chlorine atom in the Crystal Structure of the C-Terminally Truncated Transcriptional Repressor Protein Korb From the RK2 Plasmid Complexed with Ctp-Gamma- S
(pdb code 8qa8). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 22 binding sites of Chlorine where determined in the
Crystal Structure of the C-Terminally Truncated Transcriptional Repressor Protein Korb From the RK2 Plasmid Complexed with Ctp-Gamma- S, PDB code: 8qa8:
Jump to Chlorine binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Chlorine binding site 1 out
of 22 in 8qa8
Go back to
Chlorine Binding Sites List in 8qa8
Chlorine binding site 1 out
of 22 in the Crystal Structure of the C-Terminally Truncated Transcriptional Repressor Protein Korb From the RK2 Plasmid Complexed with Ctp-Gamma- S
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Crystal Structure of the C-Terminally Truncated Transcriptional Repressor Protein Korb From the RK2 Plasmid Complexed with Ctp-Gamma- S within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl302
b:53.0
occ:1.00
|
N
|
A:ALA71
|
3.5
|
38.4
|
1.0
|
CB
|
A:THR70
|
3.7
|
37.0
|
1.0
|
CA
|
A:THR70
|
3.8
|
35.3
|
1.0
|
CB
|
A:ALA71
|
4.0
|
42.3
|
1.0
|
CG2
|
A:THR70
|
4.2
|
37.5
|
1.0
|
C
|
A:THR70
|
4.2
|
36.4
|
1.0
|
CA
|
A:ALA71
|
4.4
|
40.7
|
1.0
|
OG1
|
A:THR70
|
4.9
|
37.1
|
1.0
|
|
Chlorine binding site 2 out
of 22 in 8qa8
Go back to
Chlorine Binding Sites List in 8qa8
Chlorine binding site 2 out
of 22 in the Crystal Structure of the C-Terminally Truncated Transcriptional Repressor Protein Korb From the RK2 Plasmid Complexed with Ctp-Gamma- S
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Crystal Structure of the C-Terminally Truncated Transcriptional Repressor Protein Korb From the RK2 Plasmid Complexed with Ctp-Gamma- S within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl303
b:57.6
occ:1.00
|
N
|
A:LYS127
|
3.7
|
53.6
|
1.0
|
CD
|
A:LYS126
|
4.0
|
55.9
|
1.0
|
CG
|
A:LYS127
|
4.2
|
80.3
|
1.0
|
OG
|
A:SER128
|
4.2
|
55.4
|
1.0
|
N
|
A:SER128
|
4.3
|
51.5
|
1.0
|
CB
|
A:LYS127
|
4.3
|
68.6
|
1.0
|
CA
|
A:LYS127
|
4.4
|
58.0
|
1.0
|
CA
|
A:LYS126
|
4.4
|
48.2
|
1.0
|
C
|
A:LYS126
|
4.6
|
50.7
|
1.0
|
CB
|
A:LYS126
|
4.7
|
49.6
|
1.0
|
C
|
A:LYS127
|
4.8
|
53.6
|
1.0
|
CG
|
A:LYS126
|
4.9
|
52.6
|
1.0
|
NZ
|
A:LYS126
|
4.9
|
62.6
|
1.0
|
|
Chlorine binding site 3 out
of 22 in 8qa8
Go back to
Chlorine Binding Sites List in 8qa8
Chlorine binding site 3 out
of 22 in the Crystal Structure of the C-Terminally Truncated Transcriptional Repressor Protein Korb From the RK2 Plasmid Complexed with Ctp-Gamma- S
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of Crystal Structure of the C-Terminally Truncated Transcriptional Repressor Protein Korb From the RK2 Plasmid Complexed with Ctp-Gamma- S within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl304
b:64.7
occ:1.00
|
N
|
A:GLU196
|
3.6
|
60.7
|
1.0
|
CA
|
A:PRO195
|
4.1
|
55.1
|
1.0
|
CB
|
A:GLU196
|
4.2
|
65.5
|
1.0
|
C
|
A:PRO195
|
4.4
|
58.7
|
1.0
|
CA
|
A:GLU196
|
4.5
|
62.3
|
1.0
|
CB
|
A:PRO195
|
4.5
|
55.6
|
1.0
|
CZ
|
A:PHE220
|
4.8
|
69.8
|
1.0
|
|
Chlorine binding site 4 out
of 22 in 8qa8
Go back to
Chlorine Binding Sites List in 8qa8
Chlorine binding site 4 out
of 22 in the Crystal Structure of the C-Terminally Truncated Transcriptional Repressor Protein Korb From the RK2 Plasmid Complexed with Ctp-Gamma- S
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 4 of Crystal Structure of the C-Terminally Truncated Transcriptional Repressor Protein Korb From the RK2 Plasmid Complexed with Ctp-Gamma- S within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl305
b:71.4
occ:1.00
|
N
|
A:GLU151
|
3.4
|
31.2
|
1.0
|
CG
|
A:GLU151
|
3.5
|
52.3
|
1.0
|
CA
|
A:ASN150
|
3.8
|
32.3
|
1.0
|
CD
|
A:GLU151
|
3.9
|
63.8
|
1.0
|
CB
|
A:GLU151
|
4.0
|
40.2
|
1.0
|
ND2
|
A:ASN150
|
4.1
|
35.6
|
1.0
|
C
|
A:ASN150
|
4.2
|
30.7
|
1.0
|
CA
|
A:GLU151
|
4.4
|
34.2
|
1.0
|
OE1
|
A:GLU151
|
4.4
|
64.8
|
1.0
|
CB
|
A:ASN150
|
4.4
|
33.0
|
1.0
|
O
|
A:ARG149
|
4.4
|
31.8
|
0.5
|
O
|
A:ARG149
|
4.4
|
32.4
|
0.5
|
OE2
|
A:GLU151
|
4.4
|
69.6
|
1.0
|
CG
|
A:ASN150
|
4.5
|
34.1
|
1.0
|
N
|
A:ASN150
|
4.9
|
32.5
|
1.0
|
|
Chlorine binding site 5 out
of 22 in 8qa8
Go back to
Chlorine Binding Sites List in 8qa8
Chlorine binding site 5 out
of 22 in the Crystal Structure of the C-Terminally Truncated Transcriptional Repressor Protein Korb From the RK2 Plasmid Complexed with Ctp-Gamma- S
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 5 of Crystal Structure of the C-Terminally Truncated Transcriptional Repressor Protein Korb From the RK2 Plasmid Complexed with Ctp-Gamma- S within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl302
b:61.4
occ:1.00
|
N
|
B:ALA71
|
3.3
|
41.3
|
1.0
|
CB
|
B:ALA71
|
3.8
|
43.5
|
1.0
|
CB
|
B:THR70
|
3.8
|
40.3
|
1.0
|
CA
|
B:THR70
|
3.9
|
38.1
|
1.0
|
C
|
B:THR70
|
4.1
|
38.8
|
1.0
|
CA
|
B:ALA71
|
4.2
|
42.0
|
1.0
|
CG2
|
B:THR70
|
4.3
|
41.3
|
1.0
|
OG1
|
B:THR70
|
5.0
|
39.6
|
1.0
|
|
Chlorine binding site 6 out
of 22 in 8qa8
Go back to
Chlorine Binding Sites List in 8qa8
Chlorine binding site 6 out
of 22 in the Crystal Structure of the C-Terminally Truncated Transcriptional Repressor Protein Korb From the RK2 Plasmid Complexed with Ctp-Gamma- S
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 6 of Crystal Structure of the C-Terminally Truncated Transcriptional Repressor Protein Korb From the RK2 Plasmid Complexed with Ctp-Gamma- S within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl303
b:52.0
occ:1.00
|
CG
|
B:LYS127
|
3.5
|
67.4
|
1.0
|
N
|
B:LYS127
|
3.6
|
50.4
|
1.0
|
CD
|
B:LYS126
|
4.0
|
56.3
|
1.0
|
OG
|
B:SER128
|
4.1
|
44.3
|
1.0
|
N
|
B:SER128
|
4.1
|
46.7
|
1.0
|
CB
|
B:LYS127
|
4.2
|
59.1
|
1.0
|
CA
|
B:LYS127
|
4.3
|
51.8
|
1.0
|
CA
|
B:LYS126
|
4.4
|
47.6
|
1.0
|
C
|
B:LYS126
|
4.5
|
49.7
|
1.0
|
CB
|
B:LYS126
|
4.7
|
48.0
|
1.0
|
C
|
B:LYS127
|
4.7
|
48.6
|
1.0
|
CD
|
B:LYS127
|
4.8
|
75.2
|
1.0
|
NZ
|
B:LYS126
|
4.9
|
68.9
|
1.0
|
CG
|
B:LYS126
|
5.0
|
50.6
|
1.0
|
|
Chlorine binding site 7 out
of 22 in 8qa8
Go back to
Chlorine Binding Sites List in 8qa8
Chlorine binding site 7 out
of 22 in the Crystal Structure of the C-Terminally Truncated Transcriptional Repressor Protein Korb From the RK2 Plasmid Complexed with Ctp-Gamma- S
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 7 of Crystal Structure of the C-Terminally Truncated Transcriptional Repressor Protein Korb From the RK2 Plasmid Complexed with Ctp-Gamma- S within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl304
b:70.9
occ:1.00
|
N
|
B:GLU196
|
3.7
|
58.0
|
1.0
|
CB
|
B:GLU196
|
4.1
|
65.2
|
1.0
|
O
|
B:HOH401
|
4.2
|
52.9
|
1.0
|
CA
|
B:PRO195
|
4.2
|
52.2
|
1.0
|
C
|
B:PRO195
|
4.5
|
54.2
|
1.0
|
CA
|
B:GLU196
|
4.5
|
60.7
|
1.0
|
CB
|
B:PRO195
|
4.6
|
53.4
|
1.0
|
CZ
|
B:PHE220
|
4.7
|
64.9
|
1.0
|
|
Chlorine binding site 8 out
of 22 in 8qa8
Go back to
Chlorine Binding Sites List in 8qa8
Chlorine binding site 8 out
of 22 in the Crystal Structure of the C-Terminally Truncated Transcriptional Repressor Protein Korb From the RK2 Plasmid Complexed with Ctp-Gamma- S
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 8 of Crystal Structure of the C-Terminally Truncated Transcriptional Repressor Protein Korb From the RK2 Plasmid Complexed with Ctp-Gamma- S within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl305
b:70.4
occ:1.00
|
N
|
B:GLU151
|
3.2
|
32.8
|
1.0
|
CA
|
B:ASN150
|
3.5
|
35.0
|
1.0
|
CG
|
B:GLU151
|
3.7
|
54.4
|
1.0
|
C
|
B:ASN150
|
3.9
|
32.1
|
1.0
|
CD
|
B:GLU151
|
3.9
|
66.0
|
1.0
|
OE2
|
B:GLU151
|
4.0
|
73.2
|
1.0
|
O
|
B:ARG149
|
4.0
|
33.2
|
0.5
|
O
|
B:ARG149
|
4.0
|
32.7
|
0.5
|
CB
|
B:GLU151
|
4.1
|
43.5
|
1.0
|
ND2
|
B:ASN150
|
4.1
|
44.8
|
1.0
|
CB
|
B:ASN150
|
4.2
|
37.9
|
1.0
|
CA
|
B:GLU151
|
4.3
|
37.0
|
1.0
|
O
|
B:HOH433
|
4.4
|
47.7
|
1.0
|
CG
|
B:ASN150
|
4.4
|
42.0
|
1.0
|
OE1
|
B:GLU151
|
4.5
|
69.2
|
1.0
|
N
|
B:ASN150
|
4.5
|
32.2
|
1.0
|
C
|
B:ARG149
|
4.7
|
32.5
|
0.5
|
C
|
B:ARG149
|
4.7
|
31.9
|
0.5
|
|
Chlorine binding site 9 out
of 22 in 8qa8
Go back to
Chlorine Binding Sites List in 8qa8
Chlorine binding site 9 out
of 22 in the Crystal Structure of the C-Terminally Truncated Transcriptional Repressor Protein Korb From the RK2 Plasmid Complexed with Ctp-Gamma- S
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 9 of Crystal Structure of the C-Terminally Truncated Transcriptional Repressor Protein Korb From the RK2 Plasmid Complexed with Ctp-Gamma- S within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Cl302
b:65.3
occ:1.00
|
N
|
C:ALA71
|
3.2
|
40.9
|
1.0
|
CB
|
C:THR70
|
3.6
|
38.2
|
1.0
|
CA
|
C:THR70
|
3.7
|
36.8
|
1.0
|
CB
|
C:ALA71
|
3.8
|
45.3
|
1.0
|
C
|
C:THR70
|
3.9
|
38.5
|
1.0
|
CA
|
C:ALA71
|
4.1
|
42.9
|
1.0
|
CG2
|
C:THR70
|
4.2
|
38.5
|
1.0
|
OG1
|
C:THR70
|
4.8
|
37.5
|
1.0
|
|
Chlorine binding site 10 out
of 22 in 8qa8
Go back to
Chlorine Binding Sites List in 8qa8
Chlorine binding site 10 out
of 22 in the Crystal Structure of the C-Terminally Truncated Transcriptional Repressor Protein Korb From the RK2 Plasmid Complexed with Ctp-Gamma- S
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 10 of Crystal Structure of the C-Terminally Truncated Transcriptional Repressor Protein Korb From the RK2 Plasmid Complexed with Ctp-Gamma- S within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Cl303
b:56.3
occ:1.00
|
N
|
C:LYS127
|
3.6
|
55.6
|
1.0
|
CD
|
C:LYS126
|
3.9
|
54.9
|
1.0
|
CB
|
C:LYS127
|
4.1
|
68.9
|
1.0
|
N
|
C:SER128
|
4.2
|
56.1
|
1.0
|
OG
|
C:SER128
|
4.3
|
56.1
|
1.0
|
CA
|
C:LYS126
|
4.3
|
49.4
|
1.0
|
CA
|
C:LYS127
|
4.4
|
60.9
|
1.0
|
C
|
C:LYS126
|
4.5
|
50.6
|
1.0
|
CB
|
C:LYS126
|
4.6
|
50.4
|
1.0
|
NZ
|
C:LYS126
|
4.6
|
60.2
|
1.0
|
C
|
C:LYS127
|
4.8
|
57.8
|
1.0
|
CE
|
C:LYS126
|
4.8
|
56.6
|
1.0
|
CG
|
C:LYS126
|
4.9
|
51.9
|
1.0
|
|
Reference:
T.C.Mclean,
J.E.A.Mundy,
D.M.Lawson,
T.B.K.Le.
Crystal Structure of the C-Terminally Truncated Transcriptional Repressor Protein Korb From the RK2 Plasmid Complexed with Ctp-Gamma-S To Be Published.
Page generated: Tue Jul 30 11:53:36 2024
|