Chlorine in PDB 3vfk: The Structure of Monodechloro-Teicoplanin in Complex with Its Ligand, Using Ubiquitin As A Ligand Carrier

The structure of The Structure of Monodechloro-Teicoplanin in Complex with Its Ligand, Using Ubiquitin As A Ligand Carrier, PDB code: 3vfk was solved by N.J.Economou, S.D.Weeks, K.C.Grasty, P.J.Loll, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	19.29 / 2.80
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	88.010, 25.180, 38.710, 90.00, 109.18, 90.00
R / Rfree (%)	27.8 / 30.6

The binding sites of Chlorine atom in the The Structure of Monodechloro-Teicoplanin in Complex with Its Ligand, Using Ubiquitin As A Ligand Carrier (pdb code 3vfk). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the The Structure of Monodechloro-Teicoplanin in Complex with Its Ligand, Using Ubiquitin As A Ligand Carrier, PDB code: 3vfk:

Chlorine binding site 1 out of 1 in the The Structure of Monodechloro-Teicoplanin in Complex with Its Ligand, Using Ubiquitin As A Ligand Carrier


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of The Structure of Monodechloro-Teicoplanin in Complex with Its Ligand, Using Ubiquitin As A Ligand Carrier within 5.0Å range: probe atom residue distance (Å) B Occ G:Cl2 b:93.3 occ:1.00 CL G:3MY2 0.0 93.3 1.0 CE2 G:3MY2 1.7 67.3 1.0 CZ G:3MY2 2.7 62.7 1.0 CD2 G:3MY2 2.7 65.1 1.0 OBD G:3MY2 2.8 61.8 1.0 C2 G:GHP4 3.3 67.3 1.0 C3 G:GHP4 3.3 65.7 1.0 O G:3FG3 3.8 67.8 1.0 CE1 G:3MY2 4.0 66.8 1.0 CG G:3MY2 4.0 66.2 1.0 CAH G:T559 4.1 75.4 1.0 CAD G:T559 4.2 68.0 1.0 C G:3FG3 4.4 65.6 1.0 C1 G:GHP4 4.4 68.4 1.0 CAE G:T559 4.5 78.2 1.0 C4 G:GHP4 4.5 70.6 1.0 CD1 G:3MY2 4.5 68.8 1.0 CAK G:T559 4.7 71.1 1.0 O G:T559 4.8 75.7 1.0 N G:3FG3 4.9 67.8 1.0 CAG G:T559 4.9 74.3 1.0 N G:GHP4 5.0 64.9 1.0

N.J.Economou, I.J.Zentner, E.Lazo, J.Jakoncic, V.Stojanoff, S.D.Weeks, K.C.Grasty, S.Cocklin, P.J.Loll. Structure of the Complex Between Teicoplanin and A Bacterial Cell-Wall Peptide: Use of A Carrier-Protein Approach. Acta Crystallogr.,Sect.D V. 69 520 2013.
ISSN: ISSN 0907-4449
PubMed: 23519660
DOI: 10.1107/S0907444912050469