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Chlorine in PDB 8qhg: Human Carbonic Anhydrase IX Mimic in Complex with Lasamide (2,4- Dichloro 5-Sulfamoyl Benzoic Acid)

Protein crystallography data

The structure of Human Carbonic Anhydrase IX Mimic in Complex with Lasamide (2,4- Dichloro 5-Sulfamoyl Benzoic Acid), PDB code: 8qhg was solved by C.Baroni, M.Ferraroni, F.Carta, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 78.67 / 1.91
Space group I 4 3 2
Cell size a, b, c (Å), α, β, γ (°) 157.33, 157.33, 157.33, 90, 90, 90
R / Rfree (%) 19.2 / 22

Other elements in 8qhg:

The structure of Human Carbonic Anhydrase IX Mimic in Complex with Lasamide (2,4- Dichloro 5-Sulfamoyl Benzoic Acid) also contains other interesting chemical elements:

Nickel (Ni) 1 atom
Zinc (Zn) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Human Carbonic Anhydrase IX Mimic in Complex with Lasamide (2,4- Dichloro 5-Sulfamoyl Benzoic Acid) (pdb code 8qhg). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Human Carbonic Anhydrase IX Mimic in Complex with Lasamide (2,4- Dichloro 5-Sulfamoyl Benzoic Acid), PDB code: 8qhg:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 8qhg

Go back to Chlorine Binding Sites List in 8qhg
Chlorine binding site 1 out of 2 in the Human Carbonic Anhydrase IX Mimic in Complex with Lasamide (2,4- Dichloro 5-Sulfamoyl Benzoic Acid)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Human Carbonic Anhydrase IX Mimic in Complex with Lasamide (2,4- Dichloro 5-Sulfamoyl Benzoic Acid) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl301

b:34.0
occ:1.00
CL14 A:V8I301 0.0 34.0 1.0
C5 A:V8I301 1.7 28.9 1.0
C4 A:V8I301 2.6 35.8 1.0
C6 A:V8I301 2.7 25.6 1.0
O12 A:V8I301 3.2 25.9 1.0
O13 A:V8I301 3.2 26.7 1.0
S10 A:V8I301 3.2 26.6 1.0
CD2 A:LEU198 3.4 34.0 1.0
CG2 A:VAL143 3.4 26.3 1.0
CG1 A:VAL121 3.9 26.9 1.0
C3 A:V8I301 3.9 39.9 1.0
C7 A:V8I301 4.0 29.1 1.0
CG2 A:VAL121 4.0 27.1 1.0
CD1 A:LEU141 4.3 34.5 1.0
CG2 A:VAL207 4.4 31.7 1.0
C2 A:V8I301 4.5 30.4 1.0
CG A:LEU198 4.5 33.8 1.0
CB A:VAL121 4.6 26.6 1.0
CA A:LEU198 4.6 26.1 1.0
CB A:LEU198 4.7 29.1 1.0
N11 A:V8I301 4.8 25.1 1.0
CB A:VAL143 4.8 25.1 1.0

Chlorine binding site 2 out of 2 in 8qhg

Go back to Chlorine Binding Sites List in 8qhg
Chlorine binding site 2 out of 2 in the Human Carbonic Anhydrase IX Mimic in Complex with Lasamide (2,4- Dichloro 5-Sulfamoyl Benzoic Acid)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Human Carbonic Anhydrase IX Mimic in Complex with Lasamide (2,4- Dichloro 5-Sulfamoyl Benzoic Acid) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl301

b:62.8
occ:1.00
CL15 A:V8I301 0.0 62.8 1.0
C3 A:V8I301 1.7 39.9 1.0
C4 A:V8I301 2.6 35.8 1.0
C2 A:V8I301 2.7 30.4 1.0
O8 A:V8I301 3.1 44.1 1.0
C1 A:V8I301 3.1 37.9 1.0
NE2 A:GLN92 3.7 32.3 1.0
C5 A:V8I301 3.9 28.9 1.0
C7 A:V8I301 4.0 29.1 1.0
O9 A:V8I301 4.1 44.2 1.0
C6 A:V8I301 4.4 25.6 1.0
CD A:GLN92 4.9 30.9 1.0

Reference:

C.Baroni, M.Ferraroni, F.Carta. Human Carbonic Anhydrase IX Mimic in Complex with Lasamide (2,4-Dichloro 5-Sulfamoyl Benzoic Acid) To Be Published.
Page generated: Sat Sep 28 19:27:58 2024

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