Chlorine in PDB 8qld: Bacteriophage T5 Dutpase Mutant with Loop Deletion (30-35 Aa)

The structure of Bacteriophage T5 Dutpase Mutant with Loop Deletion (30-35 Aa), PDB code: 8qld was solved by A.G.Gabdulkhakov, U.F.Dzhus, G.K.Selikhanov, A.S.Glukhov, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	20.00 / 2.10
Space group	P 65
Cell size a, b, c (Å), α, β, γ (°)	88.726, 88.726, 99.999, 90, 90, 120
R / Rfree (%)	22.1 / 26.4

The binding sites of Chlorine atom in the Bacteriophage T5 Dutpase Mutant with Loop Deletion (30-35 Aa) (pdb code 8qld). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Bacteriophage T5 Dutpase Mutant with Loop Deletion (30-35 Aa), PDB code: 8qld:

Chlorine binding site 1 out of 1 in the Bacteriophage T5 Dutpase Mutant with Loop Deletion (30-35 Aa)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Bacteriophage T5 Dutpase Mutant with Loop Deletion (30-35 Aa) within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl203 b:39.6 occ:1.00 N A:LYS88 3.0 26.0 1.0 CA A:ILE87 3.7 25.6 1.0 CB A:LYS88 3.8 27.6 1.0 O A:LYS88 3.9 22.4 1.0 C A:ILE87 3.9 25.6 1.0 CA A:LYS88 3.9 25.9 1.0 OH A:TYR83 3.9 30.9 1.0 CD1 A:ILE79 3.9 23.4 1.0 CG A:LYS88 4.0 30.2 1.0 O A:HOH352 4.0 40.4 1.0 O A:THR86 4.0 28.0 1.0 CE2 A:TYR83 4.2 29.2 1.0 CZ A:TYR83 4.2 30.4 1.0 C A:LYS88 4.3 24.0 1.0 CG2 A:ILE87 4.4 24.6 1.0 CB A:ILE87 4.6 24.4 1.0 O A:HOH353 4.7 32.6 1.0 N A:ILE87 4.7 26.6 1.0 C A:THR86 4.8 28.4 1.0

A.Glukhov, V.Marchenkov, U.Dzhus, A.Krutilina, G.Selikhanov, A.Gabdulkhakov. Bacteriophage T5 Dutpase: Combination of Common Enzymatic and Novel Functions Int J Mol Sci V. 25 2024.
ISSN: ESSN 1422-0067
DOI: 10.3390/IJMS25020892