Atomistry » Chlorine » PDB 8qsg-8r5h » 8qtl
Atomistry »
  Chlorine »
    PDB 8qsg-8r5h »
      8qtl »

Chlorine in PDB 8qtl: Aplysia Californica Acetylcholine-Binding Protein in Complex with Spiroimine (-)-4 S

Protein crystallography data

The structure of Aplysia Californica Acetylcholine-Binding Protein in Complex with Spiroimine (-)-4 S, PDB code: 8qtl was solved by G.Sulzenbacher, Y.Bourne, P.Marchot, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.97 / 1.85
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 88.343, 116.032, 131.035, 90, 90, 90
R / Rfree (%) 18.2 / 21.1

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Aplysia Californica Acetylcholine-Binding Protein in Complex with Spiroimine (-)-4 S (pdb code 8qtl). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 6 binding sites of Chlorine where determined in the Aplysia Californica Acetylcholine-Binding Protein in Complex with Spiroimine (-)-4 S, PDB code: 8qtl:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5; 6;

Chlorine binding site 1 out of 6 in 8qtl

Go back to Chlorine Binding Sites List in 8qtl
Chlorine binding site 1 out of 6 in the Aplysia Californica Acetylcholine-Binding Protein in Complex with Spiroimine (-)-4 S


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Aplysia Californica Acetylcholine-Binding Protein in Complex with Spiroimine (-)-4 S within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl303

b:40.4
occ:1.00
O A:HOH442 3.2 32.7 1.0
N A:TRP86 3.2 33.4 1.0
CA A:ILE85 3.7 34.7 1.0
CB A:ILE85 3.7 35.5 1.0
CD1 A:LEU62 3.9 41.0 1.0
CB A:TRP86 3.9 32.1 1.0
C A:ILE85 4.0 34.0 1.0
CG2 A:ILE85 4.0 36.9 1.0
CD1 A:LEU65 4.1 41.7 1.0
CA A:TRP86 4.2 31.3 1.0
CB A:TYR20 4.2 55.0 1.0
CG A:LEU65 4.3 41.7 1.0
CD2 A:LEU65 4.3 42.4 1.0
O A:TRP86 4.6 27.9 1.0
CD2 A:TYR20 4.7 46.7 1.0
CG A:TYR20 4.9 50.9 1.0
C A:TRP86 4.9 28.9 1.0

Chlorine binding site 2 out of 6 in 8qtl

Go back to Chlorine Binding Sites List in 8qtl
Chlorine binding site 2 out of 6 in the Aplysia Californica Acetylcholine-Binding Protein in Complex with Spiroimine (-)-4 S


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Aplysia Californica Acetylcholine-Binding Protein in Complex with Spiroimine (-)-4 S within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl302

b:44.1
occ:1.00
N B:TRP86 3.2 34.1 1.0
O B:HOH415 3.3 31.5 1.0
O B:HOH409 3.3 45.5 1.0
CD1 B:LEU62 3.7 40.0 1.0
O B:HOH513 3.8 52.6 1.0
CB B:TRP86 3.8 33.3 1.0
CB B:ILE85 3.8 35.5 1.0
CA B:ILE85 3.8 35.4 1.0
CD1 B:LEU65 4.1 41.4 1.0
C B:ILE85 4.1 33.4 1.0
CA B:TRP86 4.1 32.1 1.0
CB B:TYR20 4.1 49.9 1.0
CG2 B:ILE85 4.2 37.9 1.0
CD2 B:LEU65 4.2 40.8 1.0
CG B:LEU65 4.3 41.0 1.0
O B:TRP86 4.6 28.4 1.0
CG B:TYR20 4.7 45.6 1.0
CD2 B:TYR20 4.7 41.3 1.0
C B:TRP86 4.9 29.2 1.0

Chlorine binding site 3 out of 6 in 8qtl

Go back to Chlorine Binding Sites List in 8qtl
Chlorine binding site 3 out of 6 in the Aplysia Californica Acetylcholine-Binding Protein in Complex with Spiroimine (-)-4 S


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Aplysia Californica Acetylcholine-Binding Protein in Complex with Spiroimine (-)-4 S within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl302

b:41.3
occ:1.00
O C:HOH445 2.9 41.2 1.0
N C:TRP86 3.2 32.3 1.0
O C:HOH472 3.3 29.0 1.0
CB C:ILE85 3.7 35.0 1.0
CA C:ILE85 3.7 34.6 1.0
CD1 C:LEU62 3.9 37.0 1.0
CB C:TRP86 3.9 31.2 1.0
C C:ILE85 4.0 32.5 1.0
CG2 C:ILE85 4.0 36.9 1.0
CA C:TRP86 4.1 31.1 1.0
CD1 C:LEU65 4.2 35.2 1.0
CB C:TYR20 4.2 55.5 1.0
CD2 C:LEU65 4.3 37.1 1.0
CG C:LEU65 4.4 35.7 1.0
O C:TRP86 4.7 28.7 1.0
N C:TYR20 4.9 69.8 1.0
CD2 C:TYR20 4.9 45.0 1.0
C C:TRP86 5.0 28.7 1.0

Chlorine binding site 4 out of 6 in 8qtl

Go back to Chlorine Binding Sites List in 8qtl
Chlorine binding site 4 out of 6 in the Aplysia Californica Acetylcholine-Binding Protein in Complex with Spiroimine (-)-4 S


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Aplysia Californica Acetylcholine-Binding Protein in Complex with Spiroimine (-)-4 S within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl302

b:60.4
occ:1.00
NH2 D:ARG183 3.0 42.2 1.0
CG2 D:VAL185 3.9 51.7 1.0
CZ D:ARG183 4.1 41.9 1.0
CD1 D:ILE196 4.3 44.8 1.0
CG1 D:VAL185 4.3 50.8 1.0
NH1 D:ARG183 4.3 44.3 1.0
CB D:VAL185 4.7 50.4 1.0

Chlorine binding site 5 out of 6 in 8qtl

Go back to Chlorine Binding Sites List in 8qtl
Chlorine binding site 5 out of 6 in the Aplysia Californica Acetylcholine-Binding Protein in Complex with Spiroimine (-)-4 S


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Aplysia Californica Acetylcholine-Binding Protein in Complex with Spiroimine (-)-4 S within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl303

b:45.5
occ:1.00
N D:TRP86 3.2 35.5 1.0
O D:HOH432 3.3 32.0 1.0
CA D:ILE85 3.8 37.2 1.0
CB D:ILE85 3.8 36.0 1.0
CB D:TYR20 3.9 64.7 1.0
CD1 D:LEU62 3.9 44.2 1.0
CB D:TRP86 4.0 35.2 1.0
C D:ILE85 4.0 36.2 1.0
CD1 D:LEU65 4.1 41.0 1.0
CG2 D:ILE85 4.1 38.4 1.0
CA D:TRP86 4.2 35.0 1.0
CG D:MET19 4.3 89.5 1.0
CD2 D:LEU65 4.3 41.6 1.0
CG D:LEU65 4.3 42.1 1.0
N D:TYR20 4.4 76.6 1.0
O D:TRP86 4.7 32.7 1.0
CA D:TYR20 4.8 68.6 1.0
CG D:TYR20 4.9 58.4 1.0

Chlorine binding site 6 out of 6 in 8qtl

Go back to Chlorine Binding Sites List in 8qtl
Chlorine binding site 6 out of 6 in the Aplysia Californica Acetylcholine-Binding Protein in Complex with Spiroimine (-)-4 S


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 6 of Aplysia Californica Acetylcholine-Binding Protein in Complex with Spiroimine (-)-4 S within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Cl301

b:47.8
occ:1.00
O E:HOH463 3.1 49.8 1.0
N E:TRP86 3.1 34.9 1.0
O E:HOH436 3.3 35.4 1.0
CA E:ILE85 3.8 38.6 1.0
CB E:ILE85 3.8 38.7 1.0
CB E:TRP86 3.8 35.4 1.0
CD1 E:LEU62 3.9 45.0 1.0
CB E:TYR20 3.9 57.8 1.0
C E:ILE85 3.9 35.9 1.0
CA E:TRP86 4.1 34.4 1.0
CG2 E:ILE85 4.1 40.9 1.0
CD1 E:LEU65 4.2 51.1 1.0
CD2 E:LEU65 4.4 51.4 1.0
CG E:LEU65 4.4 51.5 1.0
O E:TRP86 4.6 29.9 1.0
CG E:TYR20 4.7 56.0 1.0
CD2 E:TYR20 4.7 52.9 1.0
N E:TYR20 4.7 61.4 1.0
C E:TRP86 4.9 31.6 1.0
CA E:TYR20 5.0 58.7 1.0

Reference:

Y.Bourne, G.Sulzenbacher, L.Chabaud, R.Araoz, Z.Radic, S.Conrod, P.Taylor, C.Guillou, J.Molgo, P.Marchot. The Cyclic Imine Core Common to the Marine Macrocyclic Toxins Is Sufficient to Dictate Nicotinic Acetylcholine Receptor Antagonism Mar Drugs V. 22 2024.
ISSN: ESSN 1660-3397
DOI: 10.3390/MD22040149
Page generated: Sun Jul 13 13:40:18 2025

Last articles

Co in 5IAX
Co in 5IAV
Co in 5GUN
Co in 5I8Y
Co in 5I1Y
Co in 5FHJ
Co in 5HPE
Co in 5HI0
Co in 5HL4
Co in 5FPB
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy