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Chlorine in PDB 8rjm: Serial Femtosecond X-Ray Structure of A Fluorescence Optimized Bathy Phytochrome PAIRFP2 Derived From Wild-Type AGP2 in Its Pfr State (I0A).
Enzymatic activity of Serial Femtosecond X-Ray Structure of A Fluorescence Optimized Bathy Phytochrome PAIRFP2 Derived From Wild-Type AGP2 in Its Pfr State (I0A).
All present enzymatic activity of Serial Femtosecond X-Ray Structure of A Fluorescence Optimized Bathy Phytochrome PAIRFP2 Derived From Wild-Type AGP2 in Its Pfr State (I0A).:
2.7.13.3;
2.7.13.3;
Protein crystallography data
The structure of Serial Femtosecond X-Ray Structure of A Fluorescence Optimized Bathy Phytochrome PAIRFP2 Derived From Wild-Type AGP2 in Its Pfr State (I0A)., PDB code: 8rjm
was solved by
L.Sauthof,
A.Schmidt,
M.Szczepek,
A.S.Brewster,
J.F.Kern,
P.Scheerer,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 25.75 / 2.15 |
| Space group | P 63 2 2 |
| Cell size a, b, c (Å), α, β, γ (°) | 184.98, 184.98, 182.538, 90, 90, 120 |
| R / Rfree (%) | 20.4 / 21.7 |
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Serial Femtosecond X-Ray Structure of A Fluorescence Optimized Bathy Phytochrome PAIRFP2 Derived From Wild-Type AGP2 in Its Pfr State (I0A).
(pdb code 8rjm). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 5 binding sites of Chlorine where determined in the Serial Femtosecond X-Ray Structure of A Fluorescence Optimized Bathy Phytochrome PAIRFP2 Derived From Wild-Type AGP2 in Its Pfr State (I0A)., PDB code: 8rjm:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5;
In total 5 binding sites of Chlorine where determined in the Serial Femtosecond X-Ray Structure of A Fluorescence Optimized Bathy Phytochrome PAIRFP2 Derived From Wild-Type AGP2 in Its Pfr State (I0A)., PDB code: 8rjm:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5;
Chlorine binding site 1 out of 5 in 8rjm
Go back to
Chlorine Binding Sites List in 8rjm
Chlorine binding site 1 out
of 5 in the Serial Femtosecond X-Ray Structure of A Fluorescence Optimized Bathy Phytochrome PAIRFP2 Derived From Wild-Type AGP2 in Its Pfr State (I0A).
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Serial Femtosecond X-Ray Structure of A Fluorescence Optimized Bathy Phytochrome PAIRFP2 Derived From Wild-Type AGP2 in Its Pfr State (I0A). within 5.0Å range:
|
Chlorine binding site 2 out of 5 in 8rjm
Go back to
Chlorine Binding Sites List in 8rjm
Chlorine binding site 2 out
of 5 in the Serial Femtosecond X-Ray Structure of A Fluorescence Optimized Bathy Phytochrome PAIRFP2 Derived From Wild-Type AGP2 in Its Pfr State (I0A).
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Serial Femtosecond X-Ray Structure of A Fluorescence Optimized Bathy Phytochrome PAIRFP2 Derived From Wild-Type AGP2 in Its Pfr State (I0A). within 5.0Å range:
|
Chlorine binding site 3 out of 5 in 8rjm
Go back to
Chlorine Binding Sites List in 8rjm
Chlorine binding site 3 out
of 5 in the Serial Femtosecond X-Ray Structure of A Fluorescence Optimized Bathy Phytochrome PAIRFP2 Derived From Wild-Type AGP2 in Its Pfr State (I0A).
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of Serial Femtosecond X-Ray Structure of A Fluorescence Optimized Bathy Phytochrome PAIRFP2 Derived From Wild-Type AGP2 in Its Pfr State (I0A). within 5.0Å range:
|
Chlorine binding site 4 out of 5 in 8rjm
Go back to
Chlorine Binding Sites List in 8rjm
Chlorine binding site 4 out
of 5 in the Serial Femtosecond X-Ray Structure of A Fluorescence Optimized Bathy Phytochrome PAIRFP2 Derived From Wild-Type AGP2 in Its Pfr State (I0A).
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Chlorine with other atoms in the Cl binding
site number 4 of Serial Femtosecond X-Ray Structure of A Fluorescence Optimized Bathy Phytochrome PAIRFP2 Derived From Wild-Type AGP2 in Its Pfr State (I0A). within 5.0Å range:
|
Chlorine binding site 5 out of 5 in 8rjm
Go back to
Chlorine Binding Sites List in 8rjm
Chlorine binding site 5 out
of 5 in the Serial Femtosecond X-Ray Structure of A Fluorescence Optimized Bathy Phytochrome PAIRFP2 Derived From Wild-Type AGP2 in Its Pfr State (I0A).
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Chlorine with other atoms in the Cl binding
site number 5 of Serial Femtosecond X-Ray Structure of A Fluorescence Optimized Bathy Phytochrome PAIRFP2 Derived From Wild-Type AGP2 in Its Pfr State (I0A). within 5.0Å range:
|
Reference:
L.Sauthof,
M.Szczepek,
A.Schmidt,
A.Bhowmick,
M.Dasgupta,
M.J.Mackintosh,
S.Gul,
F.D.Fuller,
R.Chatterjee,
I.D.Young,
N.Michael,
N.A.Heyder,
B.Bauer,
A.Koch,
I.Bogacz,
I.-S.Kim,
P.S.Simon,
A.Butryn,
P.Aller,
V.U.Chukhutsina,
J.M.Baxter,
C.D.M.Hutchison,
D.Liebschner,
B.Poon,
N.K.Sauter,
M.D.Miller,
G.N.Phillips Jr.,
R.Alonso-Mori,
M.S.Hunter,
A.Batyuk,
S.Owada,
K.Tono,
R.Tanaka,
J.J.Van Thor,
N.Krauss,
T.Lamparter,
A.S.Brewster,
I.Schapiro,
A.M.Orville,
V.K.Yachandra,
J.Yano,
P.Hildebrandt,
J.F.Kern,
P.Scheerer.
Serial-Femtosecond Crystallography Reveals How A Phytochrome Variant Couples Chromophore and Protein Structural Changes Sci Adv 2025.
ISSN: ESSN 2375-2548
Page generated: Sun Jul 13 13:56:47 2025
ISSN: ESSN 2375-2548
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