Chlorine in PDB 8t8s: Sortilin-Pgrn Peptide Complex

The structure of Sortilin-Pgrn Peptide Complex, PDB code: 8t8s was solved by D.B.Srivastava, A.Srivastava, G.M.Cherf, L.Y.Low, G.Kannan, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	205.27 / 2.99
Space group	P 31 2 1
Cell size a, b, c (Å), α, β, γ (°)	237.03, 237.03, 89.427, 90, 90, 120
R / Rfree (%)	23.4 / 27.5

The binding sites of Chlorine atom in the Sortilin-Pgrn Peptide Complex (pdb code 8t8s). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Sortilin-Pgrn Peptide Complex, PDB code: 8t8s:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in the Sortilin-Pgrn Peptide Complex


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Sortilin-Pgrn Peptide Complex within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl802 b:74.2 occ:1.00 OD1 A:ASP639 3.5 74.5 1.0 N A:LEU603 3.6 47.8 1.0 N A:GLY604 3.8 58.4 1.0 O A:CYS601 4.1 65.0 1.0 CA A:LEU603 4.1 48.4 1.0 CG A:ASP639 4.2 66.8 1.0 CA A:ILE602 4.3 58.1 1.0 C A:ILE602 4.3 53.4 1.0 OD2 A:ASP639 4.5 67.1 1.0 C A:LEU603 4.5 56.2 1.0 C A:CYS601 4.5 55.2 1.0 OD2 A:ASP688 4.6 57.2 1.0 N A:ILE602 4.7 56.0 1.0 CA A:GLY604 4.8 53.9 1.0 O A:GLU638 4.9 71.2 1.0 CA A:ASP639 5.0 69.6 1.0 N A:ASP639 5.0 75.9 1.0

Chlorine binding site 2 out of 3 in the Sortilin-Pgrn Peptide Complex


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Sortilin-Pgrn Peptide Complex within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl801 b:63.2 occ:1.00 OD1 B:ASP639 3.6 60.4 1.0 N B:LEU603 3.7 51.6 1.0 O B:CYS601 3.7 55.3 1.0 N B:GLY604 3.9 50.4 1.0 CG B:ASP639 4.2 61.1 1.0 CA B:LEU603 4.3 47.5 1.0 CA B:ILE602 4.3 52.1 1.0 C B:CYS601 4.4 68.2 1.0 C B:ILE602 4.4 49.9 1.0 OD2 B:ASP639 4.5 68.9 1.0 C B:LEU603 4.7 47.1 1.0 OD2 B:ASP688 4.7 60.5 1.0 N B:ILE602 4.7 55.7 1.0 O B:GLU638 4.8 72.1 1.0 CA B:GLY604 4.9 61.2 1.0 CB B:GLU638 4.9 81.0 1.0 C B:GLU638 4.9 59.5 1.0 N B:ASP639 4.9 51.5 1.0 CA B:ASP639 4.9 56.9 1.0

Chlorine binding site 3 out of 3 in the Sortilin-Pgrn Peptide Complex


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Sortilin-Pgrn Peptide Complex within 5.0Å range: probe atom residue distance (Å) B Occ C:Cl101 b:60.6 occ:1.00 N C:PRO1 3.3 49.9 1.0 CD C:PRO1 3.4 56.5 1.0 CA C:PRO1 4.7 45.8 1.0 CG C:PRO1 4.9 56.8 1.0

D.B.Srivastava, G.M.Cherf, L.Y.Low, G.Kannan. Structural Studies of Sortilin-Pgrn Peptide Complex To Be Published.