Chlorine in PDB 8t9t: Apo Crystal Structure of A Substrate Binding Protein (Isep) From An Isethionate Trap Transporter

Protein crystallography data

The structure of Apo Crystal Structure of A Substrate Binding Protein (Isep) From An Isethionate Trap Transporter, PDB code: 8t9t was solved by M.C.Newton-Vesty, R.C.J.Dobson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.67 / 1.48
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 42.925, 72.997, 95.24, 90, 90, 90
R / Rfree (%) 17 / 20.3

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Apo Crystal Structure of A Substrate Binding Protein (Isep) From An Isethionate Trap Transporter (pdb code 8t9t). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Apo Crystal Structure of A Substrate Binding Protein (Isep) From An Isethionate Trap Transporter, PDB code: 8t9t:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 8t9t

Go back to Chlorine Binding Sites List in 8t9t
Chlorine binding site 1 out of 2 in the Apo Crystal Structure of A Substrate Binding Protein (Isep) From An Isethionate Trap Transporter


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Apo Crystal Structure of A Substrate Binding Protein (Isep) From An Isethionate Trap Transporter within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl404

b:35.8
occ:1.00
HD21 A:ASN259 2.9 35.9 1.0
HB2 A:SER60 3.1 24.6 1.0
HB2 A:ARG63 3.1 30.8 0.0
O A:HOH867 3.2 44.2 1.0
HG22 A:VAL64 3.3 23.3 1.0
HD22 A:ASN259 3.3 35.8 1.0
ND2 A:ASN259 3.4 39.0 1.0
HG23 A:VAL260 3.5 21.3 1.0
HA A:SER60 3.6 26.3 1.0
HD11 A:ILE263 3.6 26.4 1.0
CB A:ARG63 3.8 30.9 1.0
HD13 A:ILE263 3.8 26.4 1.0
HD12 A:ILE263 3.8 26.4 1.0
CB A:SER60 3.9 23.9 1.0
CD1 A:ILE263 3.9 27.1 1.0
CG2 A:VAL64 4.1 23.8 1.0
HB3 A:SER60 4.1 24.6 1.0
HG21 A:VAL64 4.1 23.3 1.0
HB3 A:ARG63 4.1 30.8 0.0
CA A:SER60 4.2 26.5 1.0
O A:SER60 4.2 28.1 1.0
CG2 A:VAL260 4.3 21.6 1.0
HG22 A:VAL260 4.3 21.3 1.0
HG23 A:VAL64 4.3 23.3 1.0
HG21 A:VAL260 4.6 21.3 1.0
CG A:ASN259 4.6 30.0 1.0
C A:SER60 4.7 28.9 1.0
O A:HOH864 4.8 47.3 1.0
HA A:VAL260 5.0 20.9 1.0
CA A:ARG63 5.0 30.1 1.0

Chlorine binding site 2 out of 2 in 8t9t

Go back to Chlorine Binding Sites List in 8t9t
Chlorine binding site 2 out of 2 in the Apo Crystal Structure of A Substrate Binding Protein (Isep) From An Isethionate Trap Transporter


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Apo Crystal Structure of A Substrate Binding Protein (Isep) From An Isethionate Trap Transporter within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl405

b:40.6
occ:1.00
O A:HOH569 2.8 33.4 1.0
O A:HOH748 2.9 32.0 1.0
HA A:THR179 3.0 18.2 1.0
H A:ASP180 3.2 20.5 0.3
H A:ASP180 3.2 20.6 0.7
HA A:SER199 3.2 22.3 1.0
HH22 A:ARG177 3.3 18.9 1.0
HO2 A:EDO401 3.6 34.9 0.0
HB A:THR179 3.6 19.6 1.0
HH21 A:ARG177 3.7 18.8 1.0
NH2 A:ARG177 3.8 19.4 1.0
N A:ASP180 3.8 20.5 1.0
CA A:THR179 3.8 17.8 1.0
O2 A:EDO401 3.9 35.0 1.0
OD1 A:ASP180 4.0 28.5 0.3
O A:ILE198 4.1 20.2 1.0
OD1 A:ASP180 4.1 28.9 0.7
O A:HOH675 4.1 34.8 1.0
HB3 A:ASP180 4.1 23.5 0.3
H A:TRP200 4.1 21.1 1.0
CG A:ASP180 4.1 24.8 0.7
CG A:ASP180 4.2 23.1 0.3
C A:THR179 4.2 19.0 1.0
CB A:THR179 4.2 19.1 1.0
CA A:SER199 4.2 22.6 1.0
HG23 A:THR179 4.2 20.0 1.0
HB2 A:ASP180 4.2 24.3 0.7
OD2 A:ASP180 4.4 31.4 0.7
CB A:ASP180 4.5 24.1 0.3
CB A:ASP180 4.6 24.9 0.7
OD2 A:ASP180 4.6 28.6 0.3
C A:ILE198 4.6 20.2 1.0
N A:SER199 4.7 21.2 1.0
N A:TRP200 4.7 21.1 1.0
CG2 A:THR179 4.8 20.4 1.0
CA A:ASP180 4.8 22.6 0.3
CA A:ASP180 4.8 22.8 0.7
C A:SER199 4.9 20.5 1.0
O A:THR178 4.9 18.1 1.0
CZ A:ARG177 4.9 17.4 1.0
HB2 A:SER199 5.0 24.2 1.0

Reference:

M.C.Newton-Vesty, R.C.J.Dobson. Isethionate Trap Transporter Substrate Binding Protein Structure and Function To Be Published.
Page generated: Tue Jul 30 12:44:47 2024

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