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Chlorine in PDB 8tgx: Crystal Structure of C. Elegans Lgg-1

Protein crystallography data

The structure of Crystal Structure of C. Elegans Lgg-1, PDB code: 8tgx was solved by Y.W.S.Cheung, C.K.Yip, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 43.87 / 2.62
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 46.699, 46.699, 127.883, 90, 90, 90
R / Rfree (%) 27 / 32.3

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of C. Elegans Lgg-1 (pdb code 8tgx). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of C. Elegans Lgg-1, PDB code: 8tgx:

Chlorine binding site 1 out of 1 in 8tgx

Go back to Chlorine Binding Sites List in 8tgx
Chlorine binding site 1 out of 1 in the Crystal Structure of C. Elegans Lgg-1


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of C. Elegans Lgg-1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl201

b:44.5
occ:1.00
N A:LYS47 3.3 36.9 1.0
N A:LYS48 3.7 32.7 1.0
O A:ASP45 3.9 45.1 1.0
CA A:LYS46 4.1 38.0 1.0
CA A:LYS47 4.1 32.6 1.0
CB A:LYS47 4.2 33.8 1.0
C A:LYS46 4.2 36.3 1.0
CB A:LYS48 4.3 39.1 1.0
C A:LYS47 4.4 29.5 1.0
CA A:LYS48 4.6 33.9 1.0
CG A:LYS47 4.7 38.4 1.0
CG A:LYS48 4.8 42.9 1.0
CG A:LYS46 4.8 36.3 1.0
C A:ASP45 4.9 45.0 1.0
N A:LYS46 5.0 40.9 1.0
CB A:LYS46 5.0 37.1 1.0

Reference:

Y.W.S.Cheung, S.E.Nam, G.M.Fairlie, K.Scheu, J.M.Bui, H.R.Shariati, J.Gsponer, C.K.Yip. Structure of the Human Autophagy Factor EPG5 and the Molecular Basis of Its Conserved Mode of Interaction with ATG8-Family Proteins Autophagy 2024.
ISSN: ESSN 1554-8635
DOI: 10.1080/15548627.2024.2447213
Page generated: Sat Feb 8 17:20:13 2025

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