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Chlorine in PDB 8u93: Crystal Structure of N-Acetylneuraminate Lyase (Nana) From Klebsiella Aerogenes (Peg Bound)

Protein crystallography data

The structure of Crystal Structure of N-Acetylneuraminate Lyase (Nana) From Klebsiella Aerogenes (Peg Bound), PDB code: 8u93 was solved by Seattle Structural Genomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 36.94 / 1.90
Space group P 62 2 2
Cell size a, b, c (Å), α, β, γ (°) 96.406, 96.406, 205.982, 90, 90, 120
R / Rfree (%) 18.3 / 20.2

Other elements in 8u93:

The structure of Crystal Structure of N-Acetylneuraminate Lyase (Nana) From Klebsiella Aerogenes (Peg Bound) also contains other interesting chemical elements:

Potassium (K) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of N-Acetylneuraminate Lyase (Nana) From Klebsiella Aerogenes (Peg Bound) (pdb code 8u93). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of N-Acetylneuraminate Lyase (Nana) From Klebsiella Aerogenes (Peg Bound), PDB code: 8u93:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 8u93

Go back to Chlorine Binding Sites List in 8u93
Chlorine binding site 1 out of 2 in the Crystal Structure of N-Acetylneuraminate Lyase (Nana) From Klebsiella Aerogenes (Peg Bound)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of N-Acetylneuraminate Lyase (Nana) From Klebsiella Aerogenes (Peg Bound) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl301

b:91.5
occ:1.00
NH1 A:ARG97 4.0 52.6 1.0
CZ A:ARG97 4.0 58.4 1.0
NH2 A:ARG97 4.2 57.5 1.0
NE A:ARG97 4.5 54.1 1.0
O A:HOH410 4.6 47.4 1.0
CD A:ARG97 4.9 59.4 1.0

Chlorine binding site 2 out of 2 in 8u93

Go back to Chlorine Binding Sites List in 8u93
Chlorine binding site 2 out of 2 in the Crystal Structure of N-Acetylneuraminate Lyase (Nana) From Klebsiella Aerogenes (Peg Bound)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of N-Acetylneuraminate Lyase (Nana) From Klebsiella Aerogenes (Peg Bound) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl302

b:54.4
occ:0.50
NH1 A:ARG29 3.2 62.8 1.0
CG A:ARG29 3.6 50.4 1.0
CB A:ARG29 3.8 53.0 1.0
CD A:ARG29 3.9 53.2 1.0
CA A:ARG29 3.9 46.0 1.0
CD A:ARG32 4.1 64.7 1.0
CZ A:ARG29 4.2 62.6 1.0
NE A:ARG32 4.3 79.5 1.0
NE A:ARG29 4.5 51.4 1.0
CZ A:ARG32 4.6 83.9 1.0
N A:ARG29 4.7 43.4 1.0
NH1 A:ARG32 4.7 69.2 1.0
CB A:ARG32 4.9 43.9 1.0

Reference:

S.Lovell, L.Liu, S.Seibold, K.P.Battaile. Crystal Structure of N-Acetylneuraminate Lyase (Nana) From Klebsiella Aerogenes (Peg Bound) To Be Published.
Page generated: Thu Dec 28 03:36:21 2023

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