Chlorine in PDB 8wxw: Falcilysin in Complex with Hemoglobin Alpha Chain Peptide
Protein crystallography data
The structure of Falcilysin in Complex with Hemoglobin Alpha Chain Peptide, PDB code: 8wxw
was solved by
J.Q.Lin,
J.Lescar,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
46.09 /
1.86
|
Space group
|
P 21 21 21
|
Cell size a, b, c (Å), α, β, γ (°)
|
94.12,
105.72,
125.36,
90,
90,
90
|
R / Rfree (%)
|
18.9 /
21
|
Other elements in 8wxw:
The structure of Falcilysin in Complex with Hemoglobin Alpha Chain Peptide also contains other interesting chemical elements:
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Falcilysin in Complex with Hemoglobin Alpha Chain Peptide
(pdb code 8wxw). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 6 binding sites of Chlorine where determined in the
Falcilysin in Complex with Hemoglobin Alpha Chain Peptide, PDB code: 8wxw:
Jump to Chlorine binding site number:
1;
2;
3;
4;
5;
6;
Chlorine binding site 1 out
of 6 in 8wxw
Go back to
Chlorine Binding Sites List in 8wxw
Chlorine binding site 1 out
of 6 in the Falcilysin in Complex with Hemoglobin Alpha Chain Peptide
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Falcilysin in Complex with Hemoglobin Alpha Chain Peptide within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl1207
b:37.8
occ:1.00
|
N
|
A:SER273
|
3.2
|
29.6
|
1.0
|
O
|
P:HOH102
|
3.2
|
49.8
|
1.0
|
ND2
|
A:ASN166
|
3.3
|
29.6
|
1.0
|
OG
|
A:SER273
|
3.3
|
34.6
|
1.0
|
O
|
A:ASN271
|
3.5
|
31.6
|
1.0
|
O
|
A:HOH1458
|
3.6
|
42.2
|
1.0
|
O
|
A:HOH1315
|
3.7
|
45.0
|
1.0
|
CB
|
A:ASN166
|
3.7
|
24.0
|
1.0
|
CA
|
A:ASN166
|
3.7
|
24.2
|
1.0
|
O
|
A:HOH1839
|
3.8
|
40.4
|
1.0
|
CB
|
A:SER273
|
3.9
|
30.6
|
1.0
|
CA
|
A:ASN272
|
3.9
|
33.0
|
1.0
|
CG
|
A:ASN166
|
4.0
|
27.8
|
1.0
|
C
|
A:ASN272
|
4.0
|
30.8
|
1.0
|
CA
|
A:SER273
|
4.1
|
31.0
|
1.0
|
CE1
|
A:HIS257
|
4.2
|
38.9
|
1.0
|
OD1
|
A:ASN272
|
4.3
|
33.9
|
1.0
|
N
|
A:ASN166
|
4.3
|
25.0
|
1.0
|
N
|
A:GLY274
|
4.5
|
30.2
|
1.0
|
C
|
A:ASN271
|
4.5
|
35.2
|
1.0
|
ND1
|
A:HIS257
|
4.6
|
38.8
|
1.0
|
NZ
|
P:LYS40
|
4.6
|
50.9
|
1.0
|
N
|
A:ASN272
|
4.7
|
30.5
|
1.0
|
C
|
A:SER273
|
4.8
|
30.8
|
1.0
|
CG
|
A:ASN272
|
4.9
|
36.7
|
1.0
|
CB
|
A:ASN272
|
5.0
|
34.5
|
1.0
|
C
|
A:ASN166
|
5.0
|
27.1
|
1.0
|
C
|
A:PHE165
|
5.0
|
27.6
|
1.0
|
|
Chlorine binding site 2 out
of 6 in 8wxw
Go back to
Chlorine Binding Sites List in 8wxw
Chlorine binding site 2 out
of 6 in the Falcilysin in Complex with Hemoglobin Alpha Chain Peptide
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Falcilysin in Complex with Hemoglobin Alpha Chain Peptide within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl1208
b:37.8
occ:1.00
|
O
|
A:HOH1891
|
2.5
|
42.1
|
1.0
|
O
|
A:HOH1677
|
3.2
|
28.4
|
1.0
|
N
|
A:HIS122
|
3.3
|
32.6
|
1.0
|
OG
|
A:SER123
|
3.3
|
30.4
|
1.0
|
N
|
A:SER123
|
3.7
|
33.5
|
1.0
|
O
|
A:HOH1976
|
3.9
|
52.5
|
1.0
|
CD1
|
A:ILE127
|
4.0
|
27.4
|
1.0
|
CA
|
A:THR121
|
4.0
|
28.6
|
1.0
|
CB
|
A:SER123
|
4.1
|
31.6
|
1.0
|
C
|
A:HIS122
|
4.1
|
37.0
|
1.0
|
CA
|
A:HIS122
|
4.1
|
31.5
|
1.0
|
C
|
A:THR121
|
4.2
|
32.5
|
1.0
|
CB
|
A:THR121
|
4.2
|
32.3
|
1.0
|
CE2
|
A:PHE291
|
4.4
|
25.1
|
1.0
|
CA
|
A:SER123
|
4.4
|
38.2
|
1.0
|
CB
|
A:HIS122
|
4.4
|
34.9
|
1.0
|
CD2
|
A:PHE291
|
4.6
|
30.2
|
1.0
|
O
|
A:SER123
|
4.6
|
33.3
|
1.0
|
CG1
|
A:ILE127
|
4.7
|
30.5
|
1.0
|
C
|
A:SER123
|
4.8
|
38.8
|
1.0
|
CG2
|
A:THR121
|
4.9
|
33.2
|
1.0
|
O
|
A:HIS122
|
4.9
|
35.8
|
1.0
|
ND1
|
A:HIS122
|
5.0
|
37.7
|
1.0
|
|
Chlorine binding site 3 out
of 6 in 8wxw
Go back to
Chlorine Binding Sites List in 8wxw
Chlorine binding site 3 out
of 6 in the Falcilysin in Complex with Hemoglobin Alpha Chain Peptide
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of Falcilysin in Complex with Hemoglobin Alpha Chain Peptide within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl1209
b:66.0
occ:1.00
|
O
|
A:HOH1687
|
2.5
|
40.9
|
1.0
|
CD1
|
A:LEU782
|
4.2
|
30.0
|
1.0
|
CD2
|
A:LEU782
|
4.4
|
34.4
|
1.0
|
NH2
|
A:ARG774
|
4.4
|
32.5
|
1.0
|
CB
|
A:ASN831
|
4.5
|
32.6
|
1.0
|
CG1
|
A:ILE832
|
4.7
|
30.4
|
1.0
|
CG
|
A:LEU782
|
4.9
|
31.2
|
1.0
|
ND2
|
A:ASN831
|
4.9
|
33.1
|
1.0
|
|
Chlorine binding site 4 out
of 6 in 8wxw
Go back to
Chlorine Binding Sites List in 8wxw
Chlorine binding site 4 out
of 6 in the Falcilysin in Complex with Hemoglobin Alpha Chain Peptide
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 4 of Falcilysin in Complex with Hemoglobin Alpha Chain Peptide within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl1210
b:63.3
occ:1.00
|
ND2
|
A:ASN1177
|
3.2
|
40.7
|
1.0
|
O
|
A:HOH1597
|
3.5
|
46.5
|
1.0
|
CB
|
A:ASN1177
|
4.1
|
37.9
|
1.0
|
CG
|
A:ASN1177
|
4.2
|
39.9
|
1.0
|
CG
|
A:GLU1174
|
4.4
|
51.2
|
1.0
|
CA
|
A:GLU1174
|
4.4
|
46.2
|
1.0
|
O
|
A:LYS1173
|
4.8
|
42.0
|
1.0
|
OE2
|
A:GLU1174
|
4.8
|
56.9
|
1.0
|
CE
|
A:LYS1173
|
4.8
|
47.0
|
1.0
|
CD
|
A:GLU1174
|
4.8
|
56.3
|
1.0
|
CB
|
A:GLU1174
|
4.8
|
45.0
|
1.0
|
CG
|
A:LYS1173
|
4.9
|
41.8
|
1.0
|
N
|
A:GLU1174
|
5.0
|
44.0
|
1.0
|
|
Chlorine binding site 5 out
of 6 in 8wxw
Go back to
Chlorine Binding Sites List in 8wxw
Chlorine binding site 5 out
of 6 in the Falcilysin in Complex with Hemoglobin Alpha Chain Peptide
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 5 of Falcilysin in Complex with Hemoglobin Alpha Chain Peptide within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl1211
b:37.8
occ:1.00
|
O
|
A:HOH1374
|
3.0
|
35.2
|
1.0
|
NH2
|
A:ARG783
|
3.1
|
26.2
|
1.0
|
O
|
A:HOH1894
|
3.1
|
31.1
|
1.0
|
NH1
|
A:ARG783
|
3.2
|
26.0
|
1.0
|
CD
|
A:PRO427
|
3.5
|
27.1
|
1.0
|
CZ
|
A:ARG783
|
3.6
|
25.8
|
1.0
|
CB
|
A:THR426
|
4.0
|
29.8
|
1.0
|
CG2
|
A:THR426
|
4.2
|
29.2
|
1.0
|
CA
|
A:THR426
|
4.3
|
27.1
|
1.0
|
OE1
|
A:GLU768
|
4.4
|
31.5
|
1.0
|
CG
|
A:PRO427
|
4.4
|
33.4
|
1.0
|
O
|
A:HOH1454
|
4.5
|
31.8
|
1.0
|
CB
|
A:GLU768
|
4.7
|
24.6
|
1.0
|
O
|
A:HOH1415
|
4.7
|
27.9
|
1.0
|
N
|
A:PRO427
|
4.7
|
28.3
|
1.0
|
CG1
|
A:VAL780
|
4.8
|
23.3
|
1.0
|
NE
|
A:ARG783
|
4.9
|
24.6
|
1.0
|
|
Chlorine binding site 6 out
of 6 in 8wxw
Go back to
Chlorine Binding Sites List in 8wxw
Chlorine binding site 6 out
of 6 in the Falcilysin in Complex with Hemoglobin Alpha Chain Peptide
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 6 of Falcilysin in Complex with Hemoglobin Alpha Chain Peptide within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl1212
b:41.0
occ:1.00
|
O
|
A:HOH1516
|
3.1
|
31.2
|
1.0
|
ND2
|
A:ASN857
|
3.1
|
33.4
|
1.0
|
ND2
|
A:ASN442
|
3.3
|
35.4
|
1.0
|
NZ
|
A:LYS860
|
3.5
|
50.4
|
1.0
|
CE
|
A:LYS466
|
3.6
|
41.8
|
1.0
|
CB
|
A:ASN857
|
3.7
|
27.5
|
1.0
|
CG
|
A:ASN857
|
3.9
|
31.3
|
1.0
|
NZ
|
A:LYS466
|
4.0
|
43.9
|
1.0
|
CB
|
A:ASN442
|
4.0
|
27.6
|
1.0
|
CA
|
A:GLY464
|
4.0
|
29.2
|
1.0
|
CA
|
A:ASN857
|
4.1
|
28.2
|
1.0
|
CG
|
A:ASN442
|
4.2
|
34.4
|
1.0
|
CD
|
A:LYS860
|
4.4
|
45.7
|
1.0
|
CE
|
A:LYS860
|
4.4
|
46.8
|
1.0
|
OE1
|
A:GLU362
|
4.4
|
40.8
|
1.0
|
N
|
A:ASN857
|
4.6
|
24.4
|
1.0
|
O
|
A:HOH1980
|
4.6
|
39.0
|
1.0
|
O
|
A:GLY464
|
4.8
|
30.3
|
1.0
|
C
|
A:GLY464
|
4.9
|
28.6
|
1.0
|
CD
|
A:LYS466
|
4.9
|
39.2
|
1.0
|
|
Reference:
J.Q.Lin,
J.Lescar.
Falcilysin in Complex with Hemoglobin Alpha Chain Peptide To Be Published.
Page generated: Sun Aug 11 10:55:41 2024
|