Chlorine in PDB 8yq4: Structure of MBAOJIN2

Protein crystallography data

The structure of Structure of MBAOJIN2, PDB code: 8yq4 was solved by K.M.Boyko, A.Y.Nikolaeva, M.E.Minyaev, T.P.Kuzmicheva, A.V.Vlaskina, V.O.Popov, K.D.Pyatkevich, F.V.Subach, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 21.35 / 1.90
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 45.139, 120.298, 52.915, 90, 106.36, 90
R / Rfree (%) 17 / 20.8

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of MBAOJIN2 (pdb code 8yq4). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Structure of MBAOJIN2, PDB code: 8yq4:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 8yq4

Go back to Chlorine Binding Sites List in 8yq4
Chlorine binding site 1 out of 2 in the Structure of MBAOJIN2


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of MBAOJIN2 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl303

b:15.3
occ:1.00
O B:HOH436 3.1 13.3 1.0
NZ B:LYS61 3.2 17.1 1.0
NH2 B:ARG86 3.4 11.0 1.0
NZ B:LYS192 3.7 20.0 1.0
CD1 B:CR258 3.8 12.4 1.0
CB B:CYS150 3.8 13.7 1.0
OG1 B:THR172 3.9 10.8 1.0
NE2 B:GLN170 3.9 11.2 1.0
CE B:LYS61 3.9 16.3 1.0
CB2 B:CR258 4.1 11.5 1.0
CG1 B:VAL139 4.1 14.2 1.0
CB B:THR172 4.3 11.2 1.0
SG B:CYS150 4.3 14.4 1.0
O2 B:CR258 4.4 10.4 1.0
CG2 B:VAL152 4.5 26.0 1.0
CG2 B:CR258 4.5 11.9 1.0
CZ B:ARG86 4.6 10.8 1.0
CE B:LYS192 4.6 17.1 1.0
CG2 B:THR172 4.8 11.1 1.0
CE1 B:CR258 4.8 12.1 1.0
O B:CYS150 5.0 13.1 1.0
NE B:ARG86 5.0 10.5 1.0

Chlorine binding site 2 out of 2 in 8yq4

Go back to Chlorine Binding Sites List in 8yq4
Chlorine binding site 2 out of 2 in the Structure of MBAOJIN2


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Structure of MBAOJIN2 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl302

b:13.8
occ:1.00
O A:HOH450 3.0 14.3 1.0
NZ A:LYS61 3.2 15.4 1.0
NH2 A:ARG86 3.3 9.1 1.0
NZ A:LYS192 3.7 17.1 1.0
CD1 A:CR258 3.8 9.7 1.0
CB A:CYS150 3.8 12.3 1.0
NE2 A:GLN170 3.8 10.2 1.0
CE A:LYS61 3.9 15.2 1.0
OG1 A:THR172 3.9 10.2 1.0
CB2 A:CR258 4.1 10.2 1.0
CG1 A:VAL139 4.2 13.4 1.0
CB A:THR172 4.2 11.1 1.0
SG A:CYS150 4.3 12.8 1.0
O2 A:CR258 4.4 8.9 1.0
CZ A:ARG86 4.5 8.9 1.0
CG2 A:CR258 4.5 9.4 1.0
CG2 A:THR172 4.7 10.7 1.0
CE A:LYS192 4.7 13.9 1.0
CG1 A:VAL152 4.7 29.1 1.0
CE1 A:CR258 4.8 10.3 1.0
NE A:ARG86 4.9 8.8 1.0
O A:CYS150 5.0 12.2 1.0
CD A:GLN170 5.0 9.9 1.0

Reference:

K.M.Boyko, A.Y.Nikolaeva, M.E.Minyaev, T.P.Kuzmicheva, A.V.Vlaskina, V.O.Popov, K.D.Pyatkevich, F.V.Subach. Structure of MBAOJIN2 To Be Published.
Page generated: Tue Jul 30 13:57:16 2024

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