Chlorine in PDB 8zvb: The Shosta Toxin-Antitoxin System Provides Phage Defence

The structure of The Shosta Toxin-Antitoxin System Provides Phage Defence, PDB code: 8zvb was solved by Y.Yu, Q.Chen, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	39.57 / 2.04
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	49.381, 64.736, 64.473, 90, 91.12, 90
R / Rfree (%)	19.2 / 22.4

The binding sites of Chlorine atom in the The Shosta Toxin-Antitoxin System Provides Phage Defence (pdb code 8zvb). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the The Shosta Toxin-Antitoxin System Provides Phage Defence, PDB code: 8zvb:

Chlorine binding site 1 out of 1 in the The Shosta Toxin-Antitoxin System Provides Phage Defence


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of The Shosta Toxin-Antitoxin System Provides Phage Defence within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl502 b:55.7 occ:1.00 H A:ASN53 3.0 20.5 0.5 H A:ASN53 3.0 20.5 0.5 HH21 A:ARG56 3.1 65.3 1.0 HB A:THR52 3.2 20.8 1.0 H A:LYS54 3.5 28.1 1.0 HA A:THR52 3.6 22.2 1.0 O A:HOH689 3.7 24.5 1.0 HB A:ILE10 3.8 32.3 1.0 NH2 A:ARG56 3.8 54.4 1.0 HB2 A:ASN53 3.8 33.5 0.5 N A:ASN53 3.8 17.1 1.0 HH22 A:ARG56 3.8 65.3 1.0 O A:HOH716 3.9 29.2 1.0 HG22 A:THR52 4.0 17.9 1.0 CB A:THR52 4.0 17.4 1.0 HB3 A:ASN53 4.1 33.4 0.5 CA A:THR52 4.2 18.5 1.0 HD3 A:ARG56 4.3 57.1 1.0 N A:LYS54 4.4 23.5 1.0 HD22 A:LEU67 4.4 30.2 1.0 HZ3 A:LYS92 4.4 31.4 1.0 CG2 A:THR52 4.5 14.9 1.0 O A:LYS54 4.5 24.5 1.0 HD21 A:LEU67 4.5 30.2 1.0 HD2 A:ARG56 4.6 57.1 1.0 C A:THR52 4.6 20.2 1.0 HG13 A:ILE10 4.6 31.4 1.0 HB2 A:LYS54 4.6 35.1 1.0 CB A:ASN53 4.6 27.9 0.5 CB A:ILE10 4.7 26.9 1.0 CB A:ASN53 4.7 27.9 0.5 HB2 A:ASN53 4.7 33.4 0.5 CA A:ASN53 4.7 21.8 0.5 CA A:ASN53 4.7 25.4 0.5 HG21 A:THR52 4.8 17.9 1.0 HG12 A:ILE10 4.8 31.4 1.0 CD2 A:LEU67 4.9 25.1 1.0 CD A:ARG56 4.9 47.6 1.0 H A:ILE10 4.9 21.7 1.0 HG21 A:ILE10 4.9 28.7 1.0 HD23 A:LEU67 4.9 30.2 1.0 CG1 A:ILE10 5.0 26.2 1.0

Y.Yu, Q.Chen. A Toxin-Antitoxin System Provides Phage Defense Via Dna Damage and Repair Nat Commun 2025.
ISSN: ESSN 2041-1723
DOI: 10.1038/S41467-025-58540-9