Chlorine in PDB 9ba6: High-Resolution Crystal Structure of Vibrio Cholerae Nfeob in the Apo Form

The structure of High-Resolution Crystal Structure of Vibrio Cholerae Nfeob in the Apo Form, PDB code: 9ba6 was solved by M.Lee, A.T.Smith, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	39.46 / 2.38
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	53.962, 73.442, 63.027, 90, 94.25, 90
R / Rfree (%)	20.5 / 26.7

The binding sites of Chlorine atom in the High-Resolution Crystal Structure of Vibrio Cholerae Nfeob in the Apo Form (pdb code 9ba6). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the High-Resolution Crystal Structure of Vibrio Cholerae Nfeob in the Apo Form, PDB code: 9ba6:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in the High-Resolution Crystal Structure of Vibrio Cholerae Nfeob in the Apo Form


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of High-Resolution Crystal Structure of Vibrio Cholerae Nfeob in the Apo Form within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl305 b:60.8 occ:1.00 CD1 A:LEU172 2.3 61.4 1.0 NE A:ARG111 3.3 41.4 1.0 CG A:LEU172 3.5 55.5 1.0 NH2 A:ARG108 3.5 30.3 1.0 NH1 A:ARG108 3.6 29.2 1.0 CD2 A:LEU172 3.8 54.0 1.0 CA A:GLN174 3.9 58.5 1.0 CB A:ARG111 3.9 30.5 1.0 CG A:ARG111 3.9 32.4 1.0 NH2 A:ARG111 3.9 43.4 1.0 CZ A:ARG108 4.0 28.9 1.0 CA A:ARG111 4.0 28.9 1.0 CZ A:ARG111 4.1 43.8 1.0 CB A:LEU172 4.1 56.7 1.0 O A:LYS173 4.2 52.7 1.0 CD A:ARG111 4.2 36.0 1.0 CG A:GLN174 4.2 65.7 1.0 N A:GLN174 4.2 59.1 1.0 C A:LYS173 4.2 58.7 1.0 CB A:GLN174 4.3 62.2 1.0 C A:LEU172 4.6 59.3 1.0 O A:ARG108 4.7 28.5 1.0 N A:LYS173 4.7 58.8 1.0 O A:LEU172 4.8 56.8 1.0 C A:ARG111 4.8 28.0 1.0 O A:ARG111 4.8 29.6 1.0 CA A:LYS173 5.0 63.0 1.0

Chlorine binding site 2 out of 2 in the High-Resolution Crystal Structure of Vibrio Cholerae Nfeob in the Apo Form


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of High-Resolution Crystal Structure of Vibrio Cholerae Nfeob in the Apo Form within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl304 b:55.8 occ:1.00 NH1 B:ARG108 3.0 36.8 1.0 NH2 B:ARG108 3.0 35.4 1.0 CZ B:ARG108 3.4 34.1 1.0 NE B:ARG111 3.5 54.5 1.0 CB B:LEU172 3.6 43.5 1.0 CD1 B:LEU172 3.7 41.3 1.0 CA B:GLN174 4.0 57.2 1.0 CG B:ARG111 4.0 43.7 1.0 N B:GLN174 4.1 56.7 1.0 NH2 B:ARG111 4.2 58.6 1.0 CB B:ARG111 4.2 38.8 1.0 CG B:GLN174 4.2 67.3 1.0 CG B:LEU172 4.2 41.5 1.0 C B:LYS173 4.2 52.0 1.0 N B:LYS173 4.2 46.7 1.0 CA B:ARG111 4.3 33.3 1.0 O B:LYS173 4.3 46.6 1.0 CZ B:ARG111 4.3 56.8 1.0 OE1 B:GLN174 4.3 67.2 1.0 O B:ARG108 4.4 28.7 1.0 CD B:ARG111 4.4 49.5 1.0 CD B:GLN174 4.4 73.1 1.0 C B:LEU172 4.5 46.3 1.0 CA B:LEU172 4.6 44.4 1.0 CB B:GLN174 4.7 62.9 1.0 CD2 B:LEU172 4.7 40.1 1.0 NE B:ARG108 4.7 32.3 1.0 CA B:LYS173 4.8 53.4 1.0

M.Lee, K.Magante, C.Gomez-Garzon, S.M.Payne, A.T.Smith. Structural Determinants of Vibrio Cholerae Feob Nucleotide Promiscuity. J.Biol.Chem. V. 300 07663 2024.
ISSN: ESSN 1083-351X
PubMed: 39128725
DOI: 10.1016/J.JBC.2024.107663