Chlorine in PDB 9c6v: Crystal Structure of A Single Chain Trimer Composed of Hla-B*39:06 Y84C Variant, Beta-2MICROGLOBULIN, and Nrvmlpkaa Peptide From NLRP2 (1 Molecule/Asymmetric Unit)

The structure of Crystal Structure of A Single Chain Trimer Composed of Hla-B*39:06 Y84C Variant, Beta-2MICROGLOBULIN, and Nrvmlpkaa Peptide From NLRP2 (1 Molecule/Asymmetric Unit), PDB code: 9c6v was solved by R.Sharma, N.P.Amdare, A.Celikgil, S.J.Garforth, T.P.Dilorenzo, S.C.Almo, A.Ghosh, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	24.77 / 1.70
Space group	C 2 2 21
Cell size a, b, c (Å), α, β, γ (°)	74.954, 83.45, 148.638, 90, 90, 90
R / Rfree (%)	19.6 / 21.9

The binding sites of Chlorine atom in the Crystal Structure of A Single Chain Trimer Composed of Hla-B*39:06 Y84C Variant, Beta-2MICROGLOBULIN, and Nrvmlpkaa Peptide From NLRP2 (1 Molecule/Asymmetric Unit) (pdb code 9c6v). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of A Single Chain Trimer Composed of Hla-B*39:06 Y84C Variant, Beta-2MICROGLOBULIN, and Nrvmlpkaa Peptide From NLRP2 (1 Molecule/Asymmetric Unit), PDB code: 9c6v:

Chlorine binding site 1 out of 1 in the Crystal Structure of A Single Chain Trimer Composed of Hla-B*39:06 Y84C Variant, Beta-2MICROGLOBULIN, and Nrvmlpkaa Peptide From NLRP2 (1 Molecule/Asymmetric Unit)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of A Single Chain Trimer Composed of Hla-B*39:06 Y84C Variant, Beta-2MICROGLOBULIN, and Nrvmlpkaa Peptide From NLRP2 (1 Molecule/Asymmetric Unit) within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl2303 b:48.9 occ:1.00 N A:LYS1059 3.2 26.1 1.0 CG A:LYS1059 3.4 33.3 1.0 CB A:SER1058 3.6 26.5 1.0 O A:HOH2519 3.7 32.1 1.0 CB A:LYS1059 3.8 29.0 1.0 CA A:SER1058 3.8 24.2 1.0 C A:SER1058 4.0 25.3 1.0 CD A:LYS1059 4.0 35.9 1.0 CA A:LYS1059 4.1 26.3 1.0 OG A:SER1058 4.1 27.6 1.0 CE A:LYS1059 4.4 44.6 1.0 O A:HOH2490 4.6 32.0 1.0

R.Sharma, N.P.Amdare, A.Ghosh, J.Schloss, J.Sidney, S.J.Garforth, Y.Lopez, A.Celikgil, A.Sette, S.C.Almo, T.P.Dilorenzo. Structural and Biochemical Analysis of Highly Similar Hla-B Allotypes Differentially Associated with Type 1 Diabetes. J.Biol.Chem. 07702 2024.
ISSN: ESSN 1083-351X
PubMed: 39173948
DOI: 10.1016/J.JBC.2024.107702