Chlorine in PDB 9cva: Crystal Structure of Human Ribokinase in Complex with K+, MG2+, and Ampcp

Enzymatic activity of Crystal Structure of Human Ribokinase in Complex with K+, MG2+, and Ampcp

All present enzymatic activity of Crystal Structure of Human Ribokinase in Complex with K+, MG2+, and Ampcp:
2.7.1.15;

Protein crystallography data

The structure of Crystal Structure of Human Ribokinase in Complex with K+, MG2+, and Ampcp, PDB code: 9cva was solved by J.Park, N.Akanmori, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

*Resolution Low / High (Å)*	55.76 / 1.60
*Space group*	P 1 2₁ 1
*Cell size a, b, c (Å), α, β, γ (°)*	45.38, 70.75, 90.65, 90, 92.36, 90
*R / R_free (%)*	15.3 / 18.5

Other elements in 9cva:

The structure of Crystal Structure of Human Ribokinase in Complex with K+, MG2+, and Ampcp also contains other interesting chemical elements:

Potassium	(K)	2 atoms
Magnesium	(Mg)	2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Human Ribokinase in Complex with K+, MG2+, and Ampcp (pdb code 9cva). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Human Ribokinase in Complex with K+, MG2+, and Ampcp, PDB code: 9cva:

Chlorine binding site 1 out of 1 in 9cva

Go back to

Chlorine Binding Sites List in 9cva

Chlorine binding site 1 out of 1 in the Crystal Structure of Human Ribokinase in Complex with K+, MG2+, and Ampcp

Mono view

Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Human Ribokinase in Complex with K+, MG2+, and Ampcp within 5.0Å range:

probe	atom	residue	distance (Å)	B	Occ
B:Cl407 b:63.1 occ:1.00	ND1	B:HIS45	2.7	36.5	1.0
	O	B:HOH727	3.0	46.2	1.0
	O	B:HOH519	3.3	48.7	1.0
	CG	B:HIS45	3.5	35.2	1.0
	CB	B:HIS45	3.5	34.6	1.0
	N	B:SER33	3.6	37.8	1.0
	OG	B:SER33	3.6	50.9	1.0
	CE1	B:HIS45	3.7	37.0	1.0
	CB	B:SER33	3.9	46.3	1.0
	N	B:HIS45	3.9	27.8	1.0
	C	B:THR32	4.1	35.1	0.5
	C	B:THR32	4.2	35.0	0.5
	CA	B:SER33	4.2	45.9	1.0
	C	B:GLY44	4.3	29.0	1.0
	CA	B:HIS45	4.3	30.7	1.0
	CA	B:THR32	4.3	31.5	0.5
	O	B:HIS43	4.4	36.8	1.0
	CA	B:THR32	4.4	31.2	0.5
	CA	B:GLY44	4.4	30.2	1.0
	CD2	B:HIS45	4.7	37.0	1.0
	NE2	B:HIS45	4.8	38.2	1.0
	O	B:GLY44	4.8	33.2	1.0
	O	B:THR32	4.9	36.0	0.5
	O	B:LEU31	4.9	28.0	1.0
	O	B:THR32	5.0	36.0	0.5

Reference:

N.N.Akanmori, J.Park. Crystal Structure of Human Ribokinase in Complex with K+, MG2+, and Ampcp To Be Published.

Page generated: Sat Aug 23 00:39:22 2025

Last articles

Mg in 9UA2
Mg in 9R96
Mg in 9VM1
Mg in 9P01
Mg in 9OLO
Mg in 9PCZ
Mg in 9OLJ
Mg in 9OK5
Mg in 9P8S
Mg in 9P8V

	© Copyright 2008-2020 by atomistry.com
Home \| Site Map \| Copyright \| Contact us \| Privacy