Chlorine in PDB 9db5: A Darpin Fused to the 1TEL Crystallization Chaperone Via A Proline- Alanine Linker

Protein crystallography data

The structure of A Darpin Fused to the 1TEL Crystallization Chaperone Via A Proline- Alanine Linker, PDB code: 9db5 was solved by M.J.Pedroza Romo, J.C.Averett, A.Keliiliki, E.W.Wilson, C.Smith, D.Hansen, B.Averett, J.Gonzalez, E.Noakes, R.Nickles, T.Doukov, J.D.Moody, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.87 / 1.57
Space group P 65
Cell size a, b, c (Å), α, β, γ (°) 97.73, 97.73, 45.816, 90, 90, 120
R / Rfree (%) 16.7 / 19.6

Other elements in 9db5:

The structure of A Darpin Fused to the 1TEL Crystallization Chaperone Via A Proline- Alanine Linker also contains other interesting chemical elements:

Sodium (Na) 8 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the A Darpin Fused to the 1TEL Crystallization Chaperone Via A Proline- Alanine Linker (pdb code 9db5). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the A Darpin Fused to the 1TEL Crystallization Chaperone Via A Proline- Alanine Linker, PDB code: 9db5:

Chlorine binding site 1 out of 1 in 9db5

Go back to Chlorine Binding Sites List in 9db5
Chlorine binding site 1 out of 1 in the A Darpin Fused to the 1TEL Crystallization Chaperone Via A Proline- Alanine Linker


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of A Darpin Fused to the 1TEL Crystallization Chaperone Via A Proline- Alanine Linker within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl322

b:39.5
occ:1.00
H A:ASP105 2.2 20.8 1.0
NA A:NA315 2.6 42.8 1.0
HB2 A:ASP105 2.9 20.2 1.0
HA A:ALA104 3.0 18.4 1.0
N A:ASP105 3.0 17.4 1.0
HB3 A:ASP105 3.0 20.2 1.0
HA3 A:GLY81 3.1 18.4 1.0
H A:GLY81 3.3 18.2 1.0
CB A:ASP105 3.3 16.9 1.0
HA2 A:GLY81 3.6 18.4 1.0
N A:GLY81 3.6 15.2 1.0
CA A:GLY81 3.6 15.4 1.0
O A:ACY305 3.8 33.4 1.0
CA A:ASP105 3.8 16.1 1.0
CA A:ALA104 3.8 15.4 1.0
C A:ALA104 3.9 22.2 1.0
O A:HOH437 3.9 37.0 1.0
O A:HOH525 4.1 36.7 1.0
O A:HOH416 4.1 42.0 1.0
O A:GLY103 4.1 18.1 1.0
HB2 A:LEU80 4.3 22.2 1.0
HA A:ASP105 4.4 19.2 1.0
HB1 A:ALA104 4.4 18.8 1.0
HB2 A:ALA108 4.4 20.0 1.0
C A:LEU80 4.6 17.6 1.0
CB A:ALA104 4.7 15.7 1.0
CG A:ASP105 4.7 28.3 1.0
N A:ALA104 4.8 16.1 1.0
C A:GLY103 4.8 21.0 1.0
C A:ASP105 4.9 13.5 1.0
HB2 A:ALA104 4.9 18.8 1.0
O A:ASP105 5.0 14.7 1.0
OD2 A:ASP105 5.0 34.5 1.0
C A:ACY305 5.0 35.2 1.0

Reference:

M.J.Pedroza Romo, J.C.Averett, A.Keliiliki, E.W.Wilson, C.Smith, D.Hansen, B.Averett, J.Gonzalez, E.Noakes, R.Nickles, T.Doukov, J.D.Moody. Optimal Telsam-Target Protein Linker Character Is Target Protein Dependent To Be Published.
Page generated: Thu Oct 31 18:10:33 2024

Last articles

Zn in 9IRQ
Zn in 9IYX
Zn in 9J8P
Zn in 9IUU
Zn in 9GBF
Zn in 9G2V
Zn in 9G2L
Zn in 9G2X
Zn in 9G2Z
Zn in 9G2K
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy