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Chlorine in PDB 9db5: A Darpin Fused to the 1TEL Crystallization Chaperone Via A Proline- Alanine Linker

Protein crystallography data

The structure of A Darpin Fused to the 1TEL Crystallization Chaperone Via A Proline- Alanine Linker, PDB code: 9db5 was solved by M.J.Pedroza Romo, J.C.Averett, A.Keliiliki, E.W.Wilson, C.Smith, D.Hansen, B.Averett, J.Gonzalez, E.Noakes, R.Nickles, T.Doukov, J.D.Moody, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.87 / 1.57
Space group P 65
Cell size a, b, c (Å), α, β, γ (°) 97.73, 97.73, 45.816, 90, 90, 120
R / Rfree (%) 16.7 / 19.6

Other elements in 9db5:

The structure of A Darpin Fused to the 1TEL Crystallization Chaperone Via A Proline- Alanine Linker also contains other interesting chemical elements:

Sodium (Na) 8 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the A Darpin Fused to the 1TEL Crystallization Chaperone Via A Proline- Alanine Linker (pdb code 9db5). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the A Darpin Fused to the 1TEL Crystallization Chaperone Via A Proline- Alanine Linker, PDB code: 9db5:

Chlorine binding site 1 out of 1 in 9db5

Go back to Chlorine Binding Sites List in 9db5
Chlorine binding site 1 out of 1 in the A Darpin Fused to the 1TEL Crystallization Chaperone Via A Proline- Alanine Linker


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of A Darpin Fused to the 1TEL Crystallization Chaperone Via A Proline- Alanine Linker within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl322

b:39.5
occ:1.00
H A:ASP105 2.2 20.8 1.0
NA A:NA315 2.6 42.8 1.0
HB2 A:ASP105 2.9 20.2 1.0
HA A:ALA104 3.0 18.4 1.0
N A:ASP105 3.0 17.4 1.0
HB3 A:ASP105 3.0 20.2 1.0
HA3 A:GLY81 3.1 18.4 1.0
H A:GLY81 3.3 18.2 1.0
CB A:ASP105 3.3 16.9 1.0
HA2 A:GLY81 3.6 18.4 1.0
N A:GLY81 3.6 15.2 1.0
CA A:GLY81 3.6 15.4 1.0
O A:ACY305 3.8 33.4 1.0
CA A:ASP105 3.8 16.1 1.0
CA A:ALA104 3.8 15.4 1.0
C A:ALA104 3.9 22.2 1.0
O A:HOH437 3.9 37.0 1.0
O A:HOH525 4.1 36.7 1.0
O A:HOH416 4.1 42.0 1.0
O A:GLY103 4.1 18.1 1.0
HB2 A:LEU80 4.3 22.2 1.0
HA A:ASP105 4.4 19.2 1.0
HB1 A:ALA104 4.4 18.8 1.0
HB2 A:ALA108 4.4 20.0 1.0
C A:LEU80 4.6 17.6 1.0
CB A:ALA104 4.7 15.7 1.0
CG A:ASP105 4.7 28.3 1.0
N A:ALA104 4.8 16.1 1.0
C A:GLY103 4.8 21.0 1.0
C A:ASP105 4.9 13.5 1.0
HB2 A:ALA104 4.9 18.8 1.0
O A:ASP105 5.0 14.7 1.0
OD2 A:ASP105 5.0 34.5 1.0
C A:ACY305 5.0 35.2 1.0

Reference:

M.J.Pedroza Romo, J.C.Averett, A.Keliiliki, E.W.Wilson, C.Smith, D.Hansen, B.Averett, J.Gonzalez, E.Noakes, R.Nickles, T.Doukov, J.D.Moody. Optimal Telsam-Target Protein Linker Character Is Target Protein Dependent To Be Published.
Page generated: Thu Oct 31 18:10:33 2024

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