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Chlorine in PDB 9f7t: Sars-Cov-2 Papain-Like Protease (Plpro) C112S-K191D-K229R Mutant: Dimer

Enzymatic activity of Sars-Cov-2 Papain-Like Protease (Plpro) C112S-K191D-K229R Mutant: Dimer

All present enzymatic activity of Sars-Cov-2 Papain-Like Protease (Plpro) C112S-K191D-K229R Mutant: Dimer:
3.4.19.12;

Protein crystallography data

The structure of Sars-Cov-2 Papain-Like Protease (Plpro) C112S-K191D-K229R Mutant: Dimer, PDB code: 9f7t was solved by A.Camara-Artigas, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.95 / 2.05
Space group I 41 2 2
Cell size a, b, c (Å), α, β, γ (°) 140.637, 140.637, 141.434, 90, 90, 90
R / Rfree (%) 21 / 23.3

Other elements in 9f7t:

The structure of Sars-Cov-2 Papain-Like Protease (Plpro) C112S-K191D-K229R Mutant: Dimer also contains other interesting chemical elements:

Zinc (Zn) 1 atom
Sodium (Na) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Sars-Cov-2 Papain-Like Protease (Plpro) C112S-K191D-K229R Mutant: Dimer (pdb code 9f7t). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Sars-Cov-2 Papain-Like Protease (Plpro) C112S-K191D-K229R Mutant: Dimer, PDB code: 9f7t:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 9f7t

Go back to Chlorine Binding Sites List in 9f7t
Chlorine binding site 1 out of 2 in the Sars-Cov-2 Papain-Like Protease (Plpro) C112S-K191D-K229R Mutant: Dimer


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Sars-Cov-2 Papain-Like Protease (Plpro) C112S-K191D-K229R Mutant: Dimer within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl402

b:74.6
occ:1.00
HH11 A:ARG139 2.4 92.9 1.0
HD3 A:ARG139 2.8 74.2 1.0
HG3 A:GLU144 2.9 105.9 1.0
HG2 A:ARG139 3.2 74.0 1.0
HB3 A:ARG139 3.2 67.0 1.0
NH1 A:ARG139 3.3 77.5 1.0
HB2 A:GLU144 3.3 96.2 1.0
CD A:ARG139 3.6 61.9 1.0
HH12 A:ARG139 3.7 92.9 1.0
CG A:ARG139 3.7 61.7 1.0
CG A:GLU144 3.7 88.3 1.0
CB A:GLU144 3.9 80.2 1.0
CB A:ARG139 3.9 55.9 1.0
HB3 A:GLU144 3.9 96.2 1.0
HG2 A:GLU144 4.0 105.9 1.0
HD2 A:ARG139 4.2 74.2 1.0
CZ A:ARG139 4.3 78.2 1.0
NE A:ARG139 4.4 72.8 1.0
HA A:ARG139 4.5 67.6 1.0
HB2 A:ARG139 4.6 67.0 1.0
HG3 A:ARG139 4.6 74.0 1.0
CA A:ARG139 4.9 56.4 1.0
CD A:GLU144 5.0 104.2 1.0

Chlorine binding site 2 out of 2 in 9f7t

Go back to Chlorine Binding Sites List in 9f7t
Chlorine binding site 2 out of 2 in the Sars-Cov-2 Papain-Like Protease (Plpro) C112S-K191D-K229R Mutant: Dimer


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Sars-Cov-2 Papain-Like Protease (Plpro) C112S-K191D-K229R Mutant: Dimer within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl403

b:72.7
occ:1.00
H A:LYS307 2.4 78.2 1.0
HA A:PHE259 2.9 68.8 1.0
HA A:TYR306 2.9 66.8 1.0
OG1 A:THR260 3.2 61.2 1.0
N A:LYS307 3.3 65.2 1.0
HB2 A:LYS307 3.4 86.9 1.0
HB3 A:TYR306 3.4 55.5 1.0
C A:PHE259 3.5 59.6 1.0
HG1 A:THR260 3.5 73.4 1.0
CA A:PHE259 3.6 57.4 1.0
N A:THR260 3.6 58.4 1.0
H A:THR260 3.6 70.1 1.0
HD2 A:TYR306 3.7 66.9 1.0
CA A:TYR306 3.7 55.8 1.0
HD2 A:LYS307 3.8 107.7 1.0
C A:TYR306 4.0 56.9 1.0
CB A:TYR306 4.0 46.3 1.0
O A:PHE259 4.0 67.4 1.0
N A:PHE259 4.1 63.1 1.0
CB A:LYS307 4.2 72.5 1.0
CB A:THR260 4.3 57.3 1.0
CA A:LYS307 4.3 64.5 1.0
HA A:THR260 4.3 65.8 1.0
CA A:THR260 4.3 54.9 1.0
CD2 A:TYR306 4.4 55.8 1.0
O A:THR258 4.5 62.3 1.0
H A:PHE259 4.5 75.7 1.0
C A:THR258 4.5 66.9 1.0
O A:LYS307 4.5 63.3 1.0
HB A:THR260 4.6 68.8 1.0
O A:PHE305 4.6 53.6 1.0
CD A:LYS307 4.7 89.8 1.0
HG3 A:LYS307 4.7 99.9 1.0
CG A:TYR306 4.7 55.8 1.0
CG A:LYS307 4.7 83.3 1.0
HB2 A:TYR306 4.8 55.5 1.0
HB2 A:PHE259 4.9 74.6 1.0
CB A:PHE259 4.9 62.2 1.0
HB3 A:LYS307 4.9 86.9 1.0
N A:TYR306 4.9 51.7 1.0
C A:LYS307 5.0 61.9 1.0

Reference:

A.Camara-Artigas, A.Camara-Artigas. N/A N/A.
Page generated: Sun Jul 13 16:39:47 2025

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