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Chlorine in PDB 9fas: Cryoem Structure of Human Full-Length ALPHA1BETA3GAMMA2L Gaba(A)R in Complex with Pregnenolone Sulfate

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Cryoem Structure of Human Full-Length ALPHA1BETA3GAMMA2L Gaba(A)R in Complex with Pregnenolone Sulfate (pdb code 9fas). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Cryoem Structure of Human Full-Length ALPHA1BETA3GAMMA2L Gaba(A)R in Complex with Pregnenolone Sulfate, PDB code: 9fas:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in 9fas

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Chlorine binding site 1 out of 3 in the Cryoem Structure of Human Full-Length ALPHA1BETA3GAMMA2L Gaba(A)R in Complex with Pregnenolone Sulfate


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Cryoem Structure of Human Full-Length ALPHA1BETA3GAMMA2L Gaba(A)R in Complex with Pregnenolone Sulfate within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl3710

b:74.3
occ:1.00
N A:ASN189 3.3 69.7 1.0
N A:VAL53 3.5 65.3 1.0
N A:GLN190 3.8 69.1 1.0
CD2 A:TYR191 3.8 66.1 1.0
CD2 A:LEU188 3.8 65.2 1.0
CA A:LEU188 3.9 65.2 1.0
O A:VAL53 4.0 65.3 1.0
CG A:GLN190 4.1 69.1 1.0
CA A:PRO52 4.1 63.2 1.0
C A:LEU188 4.1 65.2 1.0
CA A:ASN189 4.2 69.7 1.0
CB A:LEU188 4.3 65.2 1.0
CB A:ASN189 4.3 69.7 1.0
CB A:VAL53 4.3 65.3 1.0
C A:PRO52 4.3 63.2 1.0
CA A:VAL53 4.4 65.3 1.0
CB A:PRO52 4.4 63.2 1.0
CE2 A:TYR191 4.5 66.1 1.0
C A:ASN189 4.5 69.7 1.0
C A:VAL53 4.7 65.3 1.0
CG A:LEU188 4.7 65.2 1.0
O A:ARG187 4.7 65.4 1.0
N A:TYR191 4.8 66.1 1.0
CA A:GLN190 4.8 69.1 1.0
CG2 A:VAL53 4.8 65.3 1.0
CG A:TYR191 4.8 66.1 1.0
CB A:TYR191 4.9 66.1 1.0
ND2 A:ASN189 4.9 69.7 1.0
C A:GLN190 4.9 69.1 1.0
CG A:ASN189 5.0 69.7 1.0
CB A:GLN190 5.0 69.1 1.0

Chlorine binding site 2 out of 3 in 9fas

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Chlorine binding site 2 out of 3 in the Cryoem Structure of Human Full-Length ALPHA1BETA3GAMMA2L Gaba(A)R in Complex with Pregnenolone Sulfate


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Cryoem Structure of Human Full-Length ALPHA1BETA3GAMMA2L Gaba(A)R in Complex with Pregnenolone Sulfate within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl508

b:85.8
occ:1.00
N C:VAL65 3.5 69.7 1.0
N C:TYR199 3.6 76.5 1.0
N C:GLN200 3.8 75.4 1.0
CA C:PRO64 4.0 71.1 1.0
CD2 C:PHE201 4.2 69.4 1.0
O C:VAL65 4.2 69.7 1.0
CB C:VAL65 4.3 69.7 1.0
CA C:LEU198 4.3 70.8 1.0
C C:PRO64 4.3 71.1 1.0
CA C:VAL65 4.3 69.7 1.0
O C:ARG197 4.3 74.6 1.0
CB C:GLN200 4.4 75.4 1.0
CA C:TYR199 4.4 76.5 1.0
CB C:PRO64 4.4 71.1 1.0
C C:LEU198 4.4 70.8 1.0
CD2 C:LEU198 4.5 70.8 1.0
CB C:TYR199 4.5 76.5 1.0
CD2 C:TYR199 4.5 76.5 1.0
CA C:GLN200 4.6 75.4 1.0
C C:TYR199 4.6 76.5 1.0
CG2 C:VAL65 4.7 69.7 1.0
C C:VAL65 4.7 69.7 1.0
CE2 C:PHE201 4.7 69.4 1.0
N C:PHE201 4.8 69.4 1.0
CG C:GLN200 4.8 75.4 1.0
CG C:TYR199 5.0 76.5 1.0

Chlorine binding site 3 out of 3 in 9fas

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Chlorine binding site 3 out of 3 in the Cryoem Structure of Human Full-Length ALPHA1BETA3GAMMA2L Gaba(A)R in Complex with Pregnenolone Sulfate


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Cryoem Structure of Human Full-Length ALPHA1BETA3GAMMA2L Gaba(A)R in Complex with Pregnenolone Sulfate within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl3911

b:72.5
occ:1.00
N D:ASN189 3.2 69.8 1.0
N D:GLN190 3.7 69.3 1.0
N D:VAL53 3.7 65.7 1.0
CD2 D:TYR191 3.7 65.3 1.0
CA D:LEU188 3.9 65.5 1.0
CG D:GLN190 3.9 69.3 1.0
CD2 D:LEU188 4.0 65.5 1.0
C D:LEU188 4.1 65.5 1.0
CA D:ASN189 4.1 69.8 1.0
O D:VAL53 4.1 65.7 1.0
CB D:ASN189 4.1 69.8 1.0
CA D:PRO52 4.3 64.3 1.0
CB D:LEU188 4.3 65.5 1.0
C D:ASN189 4.4 69.8 1.0
CE2 D:TYR191 4.4 65.3 1.0
CB D:VAL53 4.4 65.7 1.0
CA D:VAL53 4.5 65.7 1.0
C D:PRO52 4.5 64.3 1.0
N D:TYR191 4.6 65.3 1.0
CA D:GLN190 4.6 69.3 1.0
CB D:PRO52 4.6 64.3 1.0
ND2 D:ASN189 4.6 69.8 1.0
CG D:TYR191 4.7 65.3 1.0
CB D:TYR191 4.7 65.3 1.0
CG D:ASN189 4.7 69.8 1.0
C D:GLN190 4.8 69.3 1.0
C D:VAL53 4.8 65.7 1.0
CG D:LEU188 4.8 65.5 1.0
O D:ARG187 4.8 64.8 1.0
CB D:GLN190 4.9 69.3 1.0
CG2 D:VAL53 4.9 65.7 1.0
NE2 D:GLN190 4.9 69.3 1.0

Reference:

V.B.Kasaragod, A.R.Aricescu. Cryoem Structure of Human Full-Length ALPHA1BETA3GAMMA2L Gaba(A)R in Complex with Pregnenolone Sulfate To Be Published.
Page generated: Sun Jul 13 16:41:19 2025

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