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Chlorine in PDB 9ffu: Cryo-Em Structure of the ALPHA1BETA3 Gaba(A) Receptor in Complex with Gaba and MB25 in the Long-Lived Symmetric Desensitised State

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Cryo-Em Structure of the ALPHA1BETA3 Gaba(A) Receptor in Complex with Gaba and MB25 in the Long-Lived Symmetric Desensitised State (pdb code 9ffu). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Cryo-Em Structure of the ALPHA1BETA3 Gaba(A) Receptor in Complex with Gaba and MB25 in the Long-Lived Symmetric Desensitised State, PDB code: 9ffu:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 9ffu

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Chlorine binding site 1 out of 2 in the Cryo-Em Structure of the ALPHA1BETA3 Gaba(A) Receptor in Complex with Gaba and MB25 in the Long-Lived Symmetric Desensitised State


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Cryo-Em Structure of the ALPHA1BETA3 Gaba(A) Receptor in Complex with Gaba and MB25 in the Long-Lived Symmetric Desensitised State within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl504

b:36.1
occ:1.00
N D:ASN189 3.3 35.6 1.0
N D:VAL53 3.4 28.4 1.0
N D:GLN190 3.5 36.2 1.0
CD2 D:LEU188 3.7 26.3 1.0
CA D:LEU188 3.7 33.2 1.0
CD1 D:TYR191 3.8 29.4 1.0
C D:LEU188 4.0 33.3 1.0
CA D:PRO52 4.0 30.9 1.0
CB D:LEU188 4.0 31.0 1.0
CB D:GLN190 4.1 33.6 1.0
O D:VAL53 4.1 39.1 1.0
N D:TYR191 4.2 32.1 1.0
CB D:VAL53 4.2 29.5 1.0
CA D:ASN189 4.2 33.7 1.0
C D:PRO52 4.3 31.0 1.0
CA D:GLN190 4.3 32.3 1.0
CA D:VAL53 4.3 28.4 1.0
C D:ASN189 4.4 37.0 1.0
CG2 D:VAL53 4.5 29.9 1.0
CE1 D:TYR191 4.5 32.9 1.0
CG D:LEU188 4.5 29.6 1.0
CB D:PRO52 4.6 27.5 1.0
CB D:ASN189 4.6 31.9 1.0
C D:GLN190 4.7 30.7 1.0
CB D:TYR191 4.7 27.2 1.0
C D:VAL53 4.7 32.7 1.0
CG D:TYR191 4.7 30.2 1.0
O D:ARG187 4.8 35.9 1.0
N D:LEU188 5.0 33.2 1.0

Chlorine binding site 2 out of 2 in 9ffu

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Chlorine binding site 2 out of 2 in the Cryo-Em Structure of the ALPHA1BETA3 Gaba(A) Receptor in Complex with Gaba and MB25 in the Long-Lived Symmetric Desensitised State


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Cryo-Em Structure of the ALPHA1BETA3 Gaba(A) Receptor in Complex with Gaba and MB25 in the Long-Lived Symmetric Desensitised State within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl502

b:34.9
occ:1.00
N A:ASN189 3.3 37.5 1.0
N A:VAL53 3.5 26.9 1.0
CD2 A:TYR191 3.5 28.5 1.0
N A:GLN190 3.5 32.4 1.0
CG A:GLN190 3.8 35.0 1.0
O A:VAL53 3.9 40.7 1.0
CD2 A:LEU188 4.0 28.2 1.0
CA A:LEU188 4.1 35.2 1.0
CA A:ASN189 4.1 31.0 1.0
CE2 A:TYR191 4.2 30.6 1.0
C A:LEU188 4.2 38.4 1.0
CB A:ASN189 4.2 32.5 1.0
CB A:VAL53 4.2 28.6 1.0
CA A:PRO52 4.2 29.9 1.0
CA A:VAL53 4.3 26.8 1.0
C A:ASN189 4.3 32.4 1.0
C A:PRO52 4.4 29.4 1.0
N A:TYR191 4.4 31.2 1.0
CB A:LEU188 4.4 33.0 1.0
CA A:GLN190 4.5 33.2 1.0
CG A:TYR191 4.5 30.0 1.0
C A:VAL53 4.6 29.9 1.0
CG2 A:VAL53 4.6 28.2 1.0
CB A:TYR191 4.7 28.2 1.0
C A:GLN190 4.7 32.4 1.0
CB A:PRO52 4.7 28.2 1.0
CB A:GLN190 4.7 36.1 1.0
CG A:LEU188 4.9 31.7 1.0
NE2 A:GLN190 4.9 51.7 1.0
CD A:GLN190 4.9 45.3 1.0

Reference:

D.B.Mihaylov, T.Malinauskas, A.R.Aricescu. Cryo-Em Structure of the ALPHA1BETA3 Gaba(A) Receptor in Complex with Gaba and MB25 in the Long-Lived Symmetric Desensitised State To Be Published.
Page generated: Sun Jul 13 16:46:34 2025

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