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Chlorine in PDB 9fg2: Cryo-Em Structure of the ALPHA1BETA3GAMMA2 Gaba(A) Receptor in Complex with Gaba and NB38 in the Long-Lived Symmetric Desensitised State

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Cryo-Em Structure of the ALPHA1BETA3GAMMA2 Gaba(A) Receptor in Complex with Gaba and NB38 in the Long-Lived Symmetric Desensitised State (pdb code 9fg2). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Cryo-Em Structure of the ALPHA1BETA3GAMMA2 Gaba(A) Receptor in Complex with Gaba and NB38 in the Long-Lived Symmetric Desensitised State, PDB code: 9fg2:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 9fg2

Go back to Chlorine Binding Sites List in 9fg2
Chlorine binding site 1 out of 2 in the Cryo-Em Structure of the ALPHA1BETA3GAMMA2 Gaba(A) Receptor in Complex with Gaba and NB38 in the Long-Lived Symmetric Desensitised State


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Cryo-Em Structure of the ALPHA1BETA3GAMMA2 Gaba(A) Receptor in Complex with Gaba and NB38 in the Long-Lived Symmetric Desensitised State within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl502

b:49.2
occ:1.00
N A:ASN189 3.2 40.0 1.0
N A:VAL53 3.5 33.6 1.0
N A:GLN190 3.6 40.5 1.0
CG A:GLN190 3.8 46.9 1.0
O A:VAL53 3.9 49.0 1.0
CB A:ASN189 3.9 41.3 1.0
CD1 A:TYR191 3.9 36.8 1.0
CA A:ASN189 3.9 39.1 1.0
CA A:PRO52 4.0 33.7 1.0
CA A:LEU188 4.1 36.7 1.0
C A:LEU188 4.1 40.4 1.0
C A:ASN189 4.3 40.3 1.0
C A:PRO52 4.3 36.7 1.0
CD2 A:LEU188 4.3 30.4 1.0
CB A:PRO52 4.3 33.7 1.0
CA A:VAL53 4.4 33.5 1.0
CB A:VAL53 4.4 34.0 1.0
N A:TYR191 4.5 37.7 1.0
CB A:LEU188 4.5 35.5 1.0
CA A:GLN190 4.6 40.7 1.0
C A:VAL53 4.6 39.1 1.0
CE1 A:TYR191 4.6 35.8 1.0
CG2 A:VAL53 4.7 33.7 1.0
CG A:ASN189 4.7 43.5 1.0
NE2 A:GLN190 4.7 67.1 1.0
CB A:GLN190 4.8 41.5 1.0
ND2 A:ASN189 4.8 44.1 1.0
C A:GLN190 4.8 40.0 1.0
CD A:GLN190 4.9 60.2 1.0
O A:ARG187 4.9 37.5 1.0
CB A:TYR191 4.9 32.5 1.0
CG A:TYR191 4.9 33.5 1.0

Chlorine binding site 2 out of 2 in 9fg2

Go back to Chlorine Binding Sites List in 9fg2
Chlorine binding site 2 out of 2 in the Cryo-Em Structure of the ALPHA1BETA3GAMMA2 Gaba(A) Receptor in Complex with Gaba and NB38 in the Long-Lived Symmetric Desensitised State


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Cryo-Em Structure of the ALPHA1BETA3GAMMA2 Gaba(A) Receptor in Complex with Gaba and NB38 in the Long-Lived Symmetric Desensitised State within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl502

b:62.7
occ:1.00
N C:GLN200 3.3 55.8 1.0
N C:TYR199 3.5 51.3 1.0
CD1 C:PHE201 3.8 41.0 1.0
N C:VAL65 3.8 38.2 1.0
CB C:GLN200 3.9 56.3 1.0
OE1 C:GLN200 3.9 84.2 1.0
CA C:GLN200 4.1 53.1 1.0
CA C:TYR199 4.2 51.0 1.0
C C:TYR199 4.2 57.0 1.0
N C:PHE201 4.2 47.5 1.0
CA C:LEU198 4.2 48.1 1.0
CG C:GLN200 4.3 63.6 1.0
C C:LEU198 4.3 50.4 1.0
O C:VAL65 4.3 52.3 1.0
CD2 C:TYR199 4.3 59.3 1.0
CB C:TYR199 4.3 50.4 1.0
CE1 C:PHE201 4.4 37.9 1.0
CB C:VAL65 4.4 30.9 1.0
O C:ARG197 4.5 56.8 1.0
CA C:PRO64 4.5 45.8 1.0
CD C:GLN200 4.6 84.2 1.0
CA C:VAL65 4.6 34.4 1.0
C C:GLN200 4.6 53.5 1.0
CG C:TYR199 4.6 56.8 1.0
CD2 C:LEU198 4.7 40.3 1.0
CG2 C:VAL65 4.7 30.4 1.0
C C:PRO64 4.7 46.5 1.0
CG C:PHE201 4.8 39.8 1.0
C C:VAL65 4.9 40.9 1.0
CB C:PHE201 4.9 39.3 1.0
CB C:PRO64 5.0 46.5 1.0
CB C:LEU198 5.0 45.6 1.0

Reference:

D.B.Mihaylov, T.Malinauskas, A.R.Aricescu. Cryo-Em Structure of the ALPHA1BETA3GAMMA2 Gaba(A) Receptor in Complex with Gaba and NB38 in the Long-Lived Symmetric Desensitised State To Be Published.
Page generated: Sun Jul 13 16:46:41 2025

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