Chlorine in PDB 9g0w: Auxin Transporter PIN8 As Asymmetric Dimer (Inward/Outward) with 2,4-D Bound in the Inward Vestibule Prebinding State
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Auxin Transporter PIN8 As Asymmetric Dimer (Inward/Outward) with 2,4-D Bound in the Inward Vestibule Prebinding State
(pdb code 9g0w). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the
Auxin Transporter PIN8 As Asymmetric Dimer (Inward/Outward) with 2,4-D Bound in the Inward Vestibule Prebinding State, PDB code: 9g0w:
Jump to Chlorine binding site number:
1;
2;
Chlorine binding site 1 out
of 2 in 9g0w
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Chlorine Binding Sites List in 9g0w
Chlorine binding site 1 out
of 2 in the Auxin Transporter PIN8 As Asymmetric Dimer (Inward/Outward) with 2,4-D Bound in the Inward Vestibule Prebinding State
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Auxin Transporter PIN8 As Asymmetric Dimer (Inward/Outward) with 2,4-D Bound in the Inward Vestibule Prebinding State within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl401
b:63.1
occ:1.00
|
CL3
|
A:CFA401
|
0.0
|
63.1
|
1.0
|
C2'
|
A:CFA401
|
1.8
|
63.1
|
1.0
|
HG23
|
A:ILE51
|
2.7
|
57.8
|
1.0
|
C1'
|
A:CFA401
|
2.7
|
63.1
|
1.0
|
C3'
|
A:CFA401
|
2.8
|
63.1
|
1.0
|
HG22
|
A:VAL328
|
2.8
|
64.4
|
1.0
|
HG21
|
A:VAL328
|
2.8
|
64.4
|
1.0
|
H3'
|
A:CFA401
|
2.9
|
63.1
|
1.0
|
H2C1
|
A:CFA401
|
3.0
|
63.1
|
1.0
|
O1'
|
A:CFA401
|
3.0
|
63.1
|
1.0
|
CG2
|
A:VAL328
|
3.2
|
64.4
|
1.0
|
C2
|
A:CFA401
|
3.3
|
63.1
|
1.0
|
C1
|
A:CFA401
|
3.4
|
63.1
|
1.0
|
HD13
|
A:ILE51
|
3.5
|
57.8
|
1.0
|
H2
|
A:HOH503
|
3.5
|
60.9
|
1.0
|
O2
|
A:CFA401
|
3.6
|
63.1
|
1.0
|
CG2
|
A:ILE51
|
3.6
|
57.8
|
1.0
|
HG23
|
A:VAL328
|
3.6
|
64.4
|
1.0
|
HG22
|
A:ILE51
|
3.8
|
57.8
|
1.0
|
H
|
A:VAL328
|
4.0
|
64.4
|
1.0
|
HG13
|
A:ILE51
|
4.0
|
57.8
|
1.0
|
O1
|
A:CFA401
|
4.0
|
63.1
|
1.0
|
HG21
|
A:ILE51
|
4.0
|
57.8
|
1.0
|
C6'
|
A:CFA401
|
4.0
|
63.1
|
1.0
|
C4'
|
A:CFA401
|
4.0
|
63.1
|
1.0
|
HB
|
A:VAL327
|
4.1
|
64.1
|
1.0
|
O
|
A:HOH503
|
4.2
|
60.9
|
1.0
|
CD1
|
A:ILE51
|
4.3
|
57.8
|
1.0
|
H2C2
|
A:CFA401
|
4.3
|
63.1
|
1.0
|
CG1
|
A:ILE51
|
4.5
|
57.8
|
1.0
|
N
|
A:VAL328
|
4.5
|
64.4
|
1.0
|
CB
|
A:VAL328
|
4.5
|
64.4
|
1.0
|
H
|
A:VAL327
|
4.5
|
64.1
|
1.0
|
C5'
|
A:CFA401
|
4.6
|
63.1
|
1.0
|
CB
|
A:ILE51
|
4.6
|
57.8
|
1.0
|
HB
|
A:VAL328
|
4.7
|
64.4
|
1.0
|
H1
|
A:HOH503
|
4.7
|
60.9
|
1.0
|
HD12
|
A:ILE51
|
4.8
|
57.8
|
1.0
|
HB
|
A:ILE51
|
4.8
|
57.8
|
1.0
|
H6'
|
A:CFA401
|
4.9
|
63.1
|
1.0
|
HA
|
A:VAL328
|
4.9
|
64.4
|
1.0
|
HD22
|
A:ASN223
|
4.9
|
58.7
|
1.0
|
HD11
|
A:ILE51
|
4.9
|
57.8
|
1.0
|
HD13
|
A:LEU119
|
4.9
|
59.9
|
1.0
|
CA
|
A:VAL328
|
4.9
|
64.4
|
1.0
|
|
Chlorine binding site 2 out
of 2 in 9g0w
Go back to
Chlorine Binding Sites List in 9g0w
Chlorine binding site 2 out
of 2 in the Auxin Transporter PIN8 As Asymmetric Dimer (Inward/Outward) with 2,4-D Bound in the Inward Vestibule Prebinding State
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Auxin Transporter PIN8 As Asymmetric Dimer (Inward/Outward) with 2,4-D Bound in the Inward Vestibule Prebinding State within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl401
b:63.1
occ:1.00
|
CL4
|
A:CFA401
|
0.0
|
63.1
|
1.0
|
C4'
|
A:CFA401
|
1.8
|
63.1
|
1.0
|
C5'
|
A:CFA401
|
2.8
|
63.1
|
1.0
|
C3'
|
A:CFA401
|
2.8
|
63.1
|
1.0
|
H22
|
A:DMS402
|
2.8
|
65.1
|
1.0
|
HG13
|
A:VAL46
|
2.8
|
57.9
|
1.0
|
H5'
|
A:CFA401
|
2.9
|
63.1
|
1.0
|
H3'
|
A:CFA401
|
2.9
|
63.1
|
1.0
|
HB1
|
A:ALA47
|
2.9
|
56.2
|
1.0
|
H23
|
A:DMS402
|
3.1
|
65.1
|
1.0
|
C2
|
A:DMS402
|
3.3
|
65.1
|
1.0
|
HG
|
A:SER266
|
3.5
|
59.8
|
1.0
|
HG11
|
A:VAL46
|
3.5
|
57.9
|
1.0
|
CG1
|
A:VAL46
|
3.6
|
57.9
|
1.0
|
CB
|
A:ALA47
|
3.8
|
56.2
|
1.0
|
HA
|
A:ALA47
|
3.8
|
56.2
|
1.0
|
HG11
|
A:VAL327
|
3.9
|
64.1
|
1.0
|
HG13
|
A:ILE51
|
4.0
|
57.8
|
1.0
|
C2'
|
A:CFA401
|
4.0
|
63.1
|
1.0
|
C6'
|
A:CFA401
|
4.0
|
63.1
|
1.0
|
O
|
A:DMS402
|
4.1
|
65.1
|
1.0
|
HG12
|
A:VAL46
|
4.1
|
57.9
|
1.0
|
OG
|
A:SER266
|
4.1
|
59.8
|
1.0
|
H21
|
A:DMS402
|
4.2
|
65.1
|
1.0
|
CA
|
A:ALA47
|
4.2
|
56.2
|
1.0
|
HB2
|
A:ALA47
|
4.2
|
56.2
|
1.0
|
S
|
A:DMS402
|
4.2
|
65.1
|
1.0
|
O
|
A:ASN43
|
4.2
|
58.9
|
1.0
|
HG21
|
A:VAL46
|
4.2
|
57.9
|
1.0
|
N
|
A:ALA47
|
4.2
|
56.2
|
1.0
|
H
|
A:ALA47
|
4.3
|
56.2
|
1.0
|
HB2
|
A:SER266
|
4.4
|
59.8
|
1.0
|
HB3
|
A:ALA47
|
4.5
|
56.2
|
1.0
|
HG12
|
A:VAL327
|
4.5
|
64.1
|
1.0
|
C1'
|
A:CFA401
|
4.6
|
63.1
|
1.0
|
HB
|
A:VAL327
|
4.6
|
64.1
|
1.0
|
CG1
|
A:VAL327
|
4.6
|
64.1
|
1.0
|
HA
|
A:ASN43
|
4.7
|
58.9
|
1.0
|
HG22
|
A:VAL46
|
4.7
|
57.9
|
1.0
|
C
|
A:VAL46
|
4.7
|
57.9
|
1.0
|
CB
|
A:VAL46
|
4.7
|
57.9
|
1.0
|
CG2
|
A:VAL46
|
4.8
|
57.9
|
1.0
|
HB3
|
A:ASN43
|
4.8
|
58.9
|
1.0
|
CB
|
A:SER266
|
4.8
|
59.8
|
1.0
|
HG21
|
A:VAL327
|
4.9
|
64.1
|
1.0
|
H6'
|
A:CFA401
|
4.9
|
63.1
|
1.0
|
CG1
|
A:ILE51
|
4.9
|
57.8
|
1.0
|
|
Reference:
L.Schulz,
K.L.Ung,
L.Zuzic,
S.Koutnik-Abele,
D.L.Stokes,
B.P.Pedersen,
U.Z.Hammes.
Transport of Phenoxyacetic Acid Herbicides By Pin-Formed Auxin Transporters Nat.Plants 2025.
ISSN: ESSN 2055-0278
DOI: 10.1038/S41477-025-01984-0
Page generated: Sun Jul 13 16:53:22 2025
|