Atomistry » Chlorine » PDB 9g0w-9h2d » 9g8d
Atomistry »
  Chlorine »
    PDB 9g0w-9h2d »
      9g8d »

Chlorine in PDB 9g8d: Crystal Structure of the Photosensory Core Module (Pcm) of A Cyano- Phenylalanine Mutant OCNF192 of the Bathy Phytochrome AGP2 From Agrobacterium Fabrum in the Pfr State.

Enzymatic activity of Crystal Structure of the Photosensory Core Module (Pcm) of A Cyano- Phenylalanine Mutant OCNF192 of the Bathy Phytochrome AGP2 From Agrobacterium Fabrum in the Pfr State.

All present enzymatic activity of Crystal Structure of the Photosensory Core Module (Pcm) of A Cyano- Phenylalanine Mutant OCNF192 of the Bathy Phytochrome AGP2 From Agrobacterium Fabrum in the Pfr State.:
2.7.13.3;

Protein crystallography data

The structure of Crystal Structure of the Photosensory Core Module (Pcm) of A Cyano- Phenylalanine Mutant OCNF192 of the Bathy Phytochrome AGP2 From Agrobacterium Fabrum in the Pfr State., PDB code: 9g8d was solved by L.Sauthof, A.Schmidt, P.Scheerer, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 45.83 / 2.06
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 74.644, 93.577, 173.945, 90, 90, 90
R / Rfree (%) 18.6 / 22.4

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of the Photosensory Core Module (Pcm) of A Cyano- Phenylalanine Mutant OCNF192 of the Bathy Phytochrome AGP2 From Agrobacterium Fabrum in the Pfr State. (pdb code 9g8d). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of the Photosensory Core Module (Pcm) of A Cyano- Phenylalanine Mutant OCNF192 of the Bathy Phytochrome AGP2 From Agrobacterium Fabrum in the Pfr State., PDB code: 9g8d:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 9g8d

Go back to Chlorine Binding Sites List in 9g8d
Chlorine binding site 1 out of 2 in the Crystal Structure of the Photosensory Core Module (Pcm) of A Cyano- Phenylalanine Mutant OCNF192 of the Bathy Phytochrome AGP2 From Agrobacterium Fabrum in the Pfr State.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the Photosensory Core Module (Pcm) of A Cyano- Phenylalanine Mutant OCNF192 of the Bathy Phytochrome AGP2 From Agrobacterium Fabrum in the Pfr State. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl604

b:55.0
occ:1.00
 O A:HOH792 3.3 33.7 1.0
O A:HOH886 3.6 48.5 1.0
O A:HOH929 3.7 31.3 1.0
CG A:ARG151 3.7 32.0 1.0
CB A:ALA179 4.2 24.4 1.0
O A:HOH843 4.4 46.4 1.0
CB A:ARG151 4.5 28.9 1.0
CD A:ARG151 4.5 33.3 1.0
CA A:ARG151 4.6 26.7 1.0
O A:HOH955 4.8 46.3 1.0
NE A:ARG151 4.8 32.6 1.0
CA A:ALA179 4.9 24.7 1.0
NZ A:MLZ154 4.9 36.7 1.0
CD A:MLZ154 5.0 33.0 1.0

Chlorine binding site 2 out of 2 in 9g8d

Go back to Chlorine Binding Sites List in 9g8d
Chlorine binding site 2 out of 2 in the Crystal Structure of the Photosensory Core Module (Pcm) of A Cyano- Phenylalanine Mutant OCNF192 of the Bathy Phytochrome AGP2 From Agrobacterium Fabrum in the Pfr State.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of the Photosensory Core Module (Pcm) of A Cyano- Phenylalanine Mutant OCNF192 of the Bathy Phytochrome AGP2 From Agrobacterium Fabrum in the Pfr State. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl605

b:52.0
occ:1.00
 O A:HOH1010 2.8 53.8 1.0
NE A:ARG166 3.1 40.7 1.0
NH2 A:ARG311 3.1 51.1 1.0
NE1 A:TRP272 3.4 25.5 1.0
CE A:LYS308 3.5 42.4 1.0
NH2 A:ARG166 3.6 47.0 1.0
CZ A:ARG166 3.8 45.2 1.0
CD A:LYS308 3.8 40.6 1.0
CD A:ARG166 4.0 35.4 1.0
CZ2 A:TRP272 4.0 27.7 1.0
CE2 A:TRP272 4.1 26.3 1.0
CG A:LYS308 4.2 39.5 1.0
CZ A:ARG311 4.3 49.8 1.0
O A:HOH868 4.5 36.7 1.0
NH1 A:ARG311 4.5 52.6 1.0
CD1 A:TRP272 4.6 26.4 1.0
CG1 A:VAL142 4.8 30.9 1.0
NZ A:LYS308 4.9 44.3 1.0

Reference:

A.D.Nguyen, N.Michael, L.Sauthof, J.Von Sass, O.T.Hoang, A.Schmidt, M.La Greca, R.Schlesinger, N.Budisa, P.Scheerer, M.A.Mroginski, A.Kraskov, P.Hildebrandt. Hydrogen Bonding and Noncovalent Electric Field Effects in the Photoconversion of A Phytochrome. J.Phys.Chem.B 2024.
ISSN: ISSN 1089-5647
PubMed: 39561028
DOI: 10.1021/ACS.JPCB.4C06419
Page generated: Sun Jul 13 16:54:51 2025

Last articles

Fe in 2YXO
Fe in 2YRS
Fe in 2YXC
Fe in 2YNM
Fe in 2YVJ
Fe in 2YP1
Fe in 2YU2
Fe in 2YU1
Fe in 2YQB
Fe in 2YOO
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy