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Chlorine in PDB 9gsq: Dna Binding Domain of J-Dna Binding Protein 3 (JBP3)

Protein crystallography data

The structure of Dna Binding Domain of J-Dna Binding Protein 3 (JBP3), PDB code: 9gsq was solved by I.De Vries, A.Adamopoulos, R.P.Joosten, A.Perrakis, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 83.58 / 1.70
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 112.701, 40.937, 100.595, 90, 123.82, 90
R / Rfree (%) 17.4 / 21.2

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Dna Binding Domain of J-Dna Binding Protein 3 (JBP3) (pdb code 9gsq). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Dna Binding Domain of J-Dna Binding Protein 3 (JBP3), PDB code: 9gsq:

Chlorine binding site 1 out of 1 in 9gsq

Go back to Chlorine Binding Sites List in 9gsq
Chlorine binding site 1 out of 1 in the Dna Binding Domain of J-Dna Binding Protein 3 (JBP3)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Dna Binding Domain of J-Dna Binding Protein 3 (JBP3) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl305

b:71.3
occ:1.00
OG1 A:THR234 3.5 25.6 1.0
OG1 A:THR237 4.0 31.9 1.0
CA A:THR234 4.1 20.8 1.0
CB A:THR234 4.3 22.6 1.0
CB A:THR237 4.4 29.5 1.0
N A:THR234 4.5 22.0 1.0
O1 A:GOL302 4.6 63.8 1.0
CG2 A:THR237 4.7 35.6 1.0
CG2 A:THR234 4.7 22.1 1.0
O A:GLN233 4.7 21.1 1.0
C A:GLN233 4.8 23.9 1.0
CG A:GLN233 4.9 39.7 1.0

Reference:

I.De Vries, A.Adamopoulos, J.Kazokaite, T.Heidebrecht, A.Fish, P.N.H.Celie, R.P.Joosten, A.Perrakis. Base-J Binding Proteins JBP1 and JBP3 Have Conserved Structures of Their J-Dna Binding Domain But Drastically Different Affinities To Be Published.
Page generated: Thu Oct 31 18:17:35 2024

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