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Chlorine in PDB 9iwv: Crystal Structure of LSD18 After Incubation with the Substrate

Protein crystallography data

The structure of Crystal Structure of LSD18 After Incubation with the Substrate, PDB code: 9iwv was solved by Q.Wang, C.Y.Kim, X.Chen, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 32.94 / 1.85
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 47.04, 61.97, 76.29, 74.8, 81.86, 76.8
R / Rfree (%) 18.9 / 23

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of LSD18 After Incubation with the Substrate (pdb code 9iwv). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of LSD18 After Incubation with the Substrate, PDB code: 9iwv:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 9iwv

Go back to Chlorine Binding Sites List in 9iwv
Chlorine binding site 1 out of 2 in the Crystal Structure of LSD18 After Incubation with the Substrate


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of LSD18 After Incubation with the Substrate within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl503

b:32.8
occ:1.00
OG A:SER309 3.0 32.7 1.0
O A:HOH734 3.1 44.5 1.0
CB A:SER309 3.3 31.9 1.0
CA A:GLN66 3.4 22.0 1.0
NH2 A:ARG68 3.5 38.3 1.0
N A:GLN66 3.5 21.7 1.0
C A:PRO65 3.7 26.7 1.0
O A:PRO65 3.8 25.8 1.0
CB A:GLN66 3.8 21.4 1.0
OG A:SER311 4.0 41.4 1.0
CD2 A:HIS69 4.1 21.6 1.0
C8M A:FAD501 4.2 22.0 1.0
NE2 A:HIS69 4.2 22.1 1.0
CB A:PRO65 4.3 27.1 1.0
CG A:PRO65 4.4 26.7 1.0
CB A:SER311 4.5 40.6 1.0
CA A:SER309 4.5 31.5 1.0
CZ A:ARG68 4.6 38.4 1.0
CA A:PRO65 4.6 26.6 1.0
C A:GLN66 4.7 21.2 1.0
C7M A:FAD501 4.9 22.7 1.0
NE A:ARG68 4.9 36.5 1.0
O A:HOH719 5.0 43.3 1.0

Chlorine binding site 2 out of 2 in 9iwv

Go back to Chlorine Binding Sites List in 9iwv
Chlorine binding site 2 out of 2 in the Crystal Structure of LSD18 After Incubation with the Substrate


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of LSD18 After Incubation with the Substrate within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl504

b:44.0
occ:1.00
OG B:SER309 2.8 39.6 1.0
O B:HOH653 3.2 46.4 1.0
CB B:SER309 3.2 38.6 1.0
OG B:SER311 3.5 71.4 1.0
CA B:GLN66 3.5 25.5 1.0
N B:GLN66 3.7 25.5 1.0
CB B:GLN66 3.9 24.8 1.0
C B:PRO65 3.9 28.6 1.0
CB B:SER311 3.9 71.0 1.0
O B:PRO65 3.9 28.1 1.0
CD2 B:HIS69 4.0 24.6 1.0
NE2 B:HIS69 4.1 24.1 1.0
C8M B:FAD501 4.1 24.6 1.0
CB B:PRO65 4.4 28.0 1.0
CA B:SER309 4.5 35.0 1.0
CG B:PRO65 4.7 27.7 1.0
C B:GLN66 4.8 25.9 1.0
CA B:PRO65 4.8 27.6 1.0
C7M B:FAD501 4.9 25.2 1.0
N B:SER311 5.0 70.4 1.0

Reference:

Q.Wang, C.Y.Kim, X.Chen. Crystal Structure of LSD18 After Incubation with the Substrate To Be Published.
Page generated: Sun Jul 13 17:05:11 2025

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