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Chlorine in PDB 9o68: Crystal Structure of Tryptophanyl-Trna Synthetase From Klebsiella Aerogenes (Tryptophan Bound)

Enzymatic activity of Crystal Structure of Tryptophanyl-Trna Synthetase From Klebsiella Aerogenes (Tryptophan Bound)

All present enzymatic activity of Crystal Structure of Tryptophanyl-Trna Synthetase From Klebsiella Aerogenes (Tryptophan Bound):
6.1.1.2;

Protein crystallography data

The structure of Crystal Structure of Tryptophanyl-Trna Synthetase From Klebsiella Aerogenes (Tryptophan Bound), PDB code: 9o68 was solved by Seattle Structural Genomics Center For Infectious Disease, Seattlestructural Genomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.88 / 2.15
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 49.054, 120.798, 55.83, 90, 94.87, 90
R / Rfree (%) 18 / 22.3

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Tryptophanyl-Trna Synthetase From Klebsiella Aerogenes (Tryptophan Bound) (pdb code 9o68). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Crystal Structure of Tryptophanyl-Trna Synthetase From Klebsiella Aerogenes (Tryptophan Bound), PDB code: 9o68:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in 9o68

Go back to Chlorine Binding Sites List in 9o68
Chlorine binding site 1 out of 3 in the Crystal Structure of Tryptophanyl-Trna Synthetase From Klebsiella Aerogenes (Tryptophan Bound)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Tryptophanyl-Trna Synthetase From Klebsiella Aerogenes (Tryptophan Bound) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl402

b:69.7
occ:1.00
N A:LYS198 3.4 55.6 1.0
ND2 A:ASN20 3.6 46.1 1.0
OG A:SER197 3.7 60.3 1.0
CA A:SER197 3.8 52.8 1.0
C A:SER197 4.1 58.8 1.0
CB A:LYS198 4.2 53.0 1.0
CB A:SER197 4.2 59.2 1.0
OD1 A:ASN20 4.3 54.3 1.0
CA A:LYS198 4.4 62.4 1.0
CG A:ASN20 4.4 51.0 1.0
O A:MET196 4.4 50.8 1.0
N A:SER197 4.9 47.5 1.0

Chlorine binding site 2 out of 3 in 9o68

Go back to Chlorine Binding Sites List in 9o68
Chlorine binding site 2 out of 3 in the Crystal Structure of Tryptophanyl-Trna Synthetase From Klebsiella Aerogenes (Tryptophan Bound)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Tryptophanyl-Trna Synthetase From Klebsiella Aerogenes (Tryptophan Bound) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl403

b:67.5
occ:1.00
N A:GLY242 3.4 37.1 1.0
O A:HOH517 3.5 41.2 1.0
O A:HOH559 3.9 52.1 1.0
O A:THR225 3.9 65.5 1.0
CA A:GLY242 4.0 36.2 1.0
CG1 A:VAL224 4.0 48.0 1.0
C A:THR225 4.1 51.4 1.0
N A:ALA241 4.1 39.0 1.0
CG A:PRO192 4.2 39.6 1.0
C A:ALA241 4.4 37.1 1.0
N A:ASP226 4.4 47.2 1.0
CB A:ALA241 4.5 40.5 1.0
CA A:ALA241 4.5 38.3 1.0
CA A:THR225 4.6 41.4 1.0
CB A:ASP226 4.6 47.9 1.0
CA A:ASP226 4.6 50.2 1.0
C A:LYS240 4.6 39.5 1.0
O A:VAL224 4.8 42.0 1.0
CA A:LYS240 4.9 38.0 1.0
N A:THR225 4.9 40.2 1.0
C A:VAL224 5.0 38.0 1.0

Chlorine binding site 3 out of 3 in 9o68

Go back to Chlorine Binding Sites List in 9o68
Chlorine binding site 3 out of 3 in the Crystal Structure of Tryptophanyl-Trna Synthetase From Klebsiella Aerogenes (Tryptophan Bound)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of Tryptophanyl-Trna Synthetase From Klebsiella Aerogenes (Tryptophan Bound) within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl402

b:79.0
occ:1.00
OG B:SER197 3.0 81.9 1.0
ND2 B:ASN20 3.5 67.3 1.0
CA B:SER197 4.0 73.0 1.0
CB B:SER197 4.0 74.5 1.0
OD1 B:ASN20 4.3 65.0 1.0
CG B:ASN20 4.3 60.7 1.0
C B:SER197 4.4 77.0 1.0
O B:MET196 4.9 62.7 1.0

Reference:

S.Seibold, S.Lovell, K.P.Battaile. Crystal Structure of Tryptophanyl-Trna Synthetase From Klebsiella Aerogenes (Tryptophan Bound) To Be Published.
Page generated: Sun Jul 13 17:17:54 2025

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