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Chlorine in PDB 9rau: Streptococcus Pyogenes Gapn in Complex with Pyrimidine-5-Amine

Protein crystallography data

The structure of Streptococcus Pyogenes Gapn in Complex with Pyrimidine-5-Amine, PDB code: 9rau was solved by R.Wirsing, H.Schindelin, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 44.22 / 1.77
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 97.764, 98.946, 103.032, 78.04, 75.63, 67.01
R / Rfree (%) 17.5 / 21.9

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Streptococcus Pyogenes Gapn in Complex with Pyrimidine-5-Amine (pdb code 9rau). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Streptococcus Pyogenes Gapn in Complex with Pyrimidine-5-Amine, PDB code: 9rau:

Chlorine binding site 1 out of 1 in 9rau

Go back to Chlorine Binding Sites List in 9rau
Chlorine binding site 1 out of 1 in the Streptococcus Pyogenes Gapn in Complex with Pyrimidine-5-Amine


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Streptococcus Pyogenes Gapn in Complex with Pyrimidine-5-Amine within 5.0Å range:
probe atom residue distance (Å) B Occ
H:Cl507

b:36.5
occ:1.00
O H:HOH938 2.8 21.2 1.0
HB2 H:SER329 3.2 25.1 1.0
O H:HOH810 3.8 32.3 1.0
O H:HOH817 3.9 36.2 1.0
H H:SER329 4.1 24.5 1.0
CB H:SER329 4.1 20.9 1.0
HB H:THR328 4.2 19.3 1.0
HA H:SER329 4.3 23.4 1.0
N H:SER329 4.4 20.5 1.0
CA H:SER329 4.5 19.6 1.0
HB3 H:SER329 4.6 25.1 1.0
HG22 H:THR328 4.8 20.1 1.0
OG H:SER329 4.8 21.5 1.0
HG H:SER329 4.9 25.8 1.0

Reference:

R.Wirsing, H.Schindelin. Streptococcus Pyogenes Gapn in Complex with Pyrimidine-5-Amine To Be Published.
Page generated: Sat Aug 23 00:47:00 2025

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