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Chlorine in PDB 1a2d: Pyridoxamine Modified Murine Adipocyte Lipid Binding Protein

Protein crystallography data

The structure of Pyridoxamine Modified Murine Adipocyte Lipid Binding Protein, PDB code: 1a2d was solved by J.Ory, A.Mazhary, H.Kuang, R.Davies, M.Distefano, L.Banaszak, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 25.00 / 2.40
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 80.080, 96.250, 49.800, 90.00, 90.00, 90.00
R / Rfree (%) 19.6 / 27.3

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Pyridoxamine Modified Murine Adipocyte Lipid Binding Protein (pdb code 1a2d). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Pyridoxamine Modified Murine Adipocyte Lipid Binding Protein, PDB code: 1a2d:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 1a2d

Go back to Chlorine Binding Sites List in 1a2d
Chlorine binding site 1 out of 2 in the Pyridoxamine Modified Murine Adipocyte Lipid Binding Protein


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Pyridoxamine Modified Murine Adipocyte Lipid Binding Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl5001

b:45.5
occ:1.00
NE A:ARG130 3.4 31.8 1.0
NH2 A:ARG108 3.5 6.1 1.0
NH2 A:ARG130 4.2 31.9 1.0
CD A:ARG130 4.2 34.4 1.0
CZ A:ARG130 4.2 30.8 1.0
CZ A:ARG108 4.8 17.8 1.0

Chlorine binding site 2 out of 2 in 1a2d

Go back to Chlorine Binding Sites List in 1a2d
Chlorine binding site 2 out of 2 in the Pyridoxamine Modified Murine Adipocyte Lipid Binding Protein


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Pyridoxamine Modified Murine Adipocyte Lipid Binding Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl5002

b:35.7
occ:1.00
NH2 B:ARG108 3.6 19.6 1.0
NE B:ARG130 3.7 33.5 1.0
NH2 B:ARG130 4.3 30.6 1.0
CZ B:ARG130 4.4 32.0 1.0
CZ B:ARG108 4.5 18.0 1.0
CD B:ARG130 4.5 29.1 1.0
NH1 B:ARG108 4.5 11.1 1.0
O B:GLY110 5.0 37.7 1.0

Reference:

J.J.Ory, A.Mazhary, H.Kuang, R.R.Davies, M.D.Distefano, L.J.Banaszak. Structural Characterization of Two Synthetic Catalysts Based on Adipocyte Lipid-Binding Protein. Protein Eng. V. 11 253 1998.
ISSN: ISSN 0269-2139
PubMed: 9680187
DOI: 10.1093/PROTEIN/11.4.253
Page generated: Thu Jul 10 16:14:36 2025

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