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Chlorine in PDB 1dyc: Determination of Alpha-Helix Propensity Within the Context of A Folded Protein: Sites 44 and 131 in Bacteriophage T4 Lysozyme

Enzymatic activity of Determination of Alpha-Helix Propensity Within the Context of A Folded Protein: Sites 44 and 131 in Bacteriophage T4 Lysozyme

All present enzymatic activity of Determination of Alpha-Helix Propensity Within the Context of A Folded Protein: Sites 44 and 131 in Bacteriophage T4 Lysozyme:
3.2.1.17;

Protein crystallography data

The structure of Determination of Alpha-Helix Propensity Within the Context of A Folded Protein: Sites 44 and 131 in Bacteriophage T4 Lysozyme, PDB code: 1dyc was solved by X.Zhang, B.W.Matthews, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 6.00 / 2.10
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 61.100, 61.100, 96.700, 90.00, 90.00, 120.00
R / Rfree (%) n/a / n/a

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Determination of Alpha-Helix Propensity Within the Context of A Folded Protein: Sites 44 and 131 in Bacteriophage T4 Lysozyme (pdb code 1dyc). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Determination of Alpha-Helix Propensity Within the Context of A Folded Protein: Sites 44 and 131 in Bacteriophage T4 Lysozyme, PDB code: 1dyc:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 1dyc

Go back to Chlorine Binding Sites List in 1dyc
Chlorine binding site 1 out of 2 in the Determination of Alpha-Helix Propensity Within the Context of A Folded Protein: Sites 44 and 131 in Bacteriophage T4 Lysozyme


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Determination of Alpha-Helix Propensity Within the Context of A Folded Protein: Sites 44 and 131 in Bacteriophage T4 Lysozyme within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl173

b:1.0
occ:1.00
O A:HOH209 2.8 39.1 1.0
N A:ARG145 3.5 18.9 1.0
C A:THR142 3.5 23.9 1.0
N A:ASN144 3.6 18.3 1.0
CA A:THR142 3.6 19.5 1.0
O A:THR142 3.8 27.1 1.0
CB A:ASN144 3.8 26.5 1.0
CB A:THR142 3.8 28.5 1.0
N A:PRO143 4.0 32.5 1.0
CA A:ASN144 4.0 23.6 1.0
CB A:ARG145 4.2 23.6 1.0
CD A:PRO143 4.2 28.8 1.0
C A:ASN144 4.3 42.3 1.0
CG2 A:THR142 4.3 16.5 1.0
CA A:ARG145 4.4 37.3 1.0
C A:PRO143 4.5 34.0 1.0
ND2 A:ASN144 4.6 33.8 1.0
O A:HOH230 4.7 39.8 1.0
CG A:ASN144 4.7 39.8 1.0
CA A:PRO143 4.8 39.5 1.0
O A:HOH237 5.0 56.4 1.0
N A:THR142 5.0 31.0 1.0

Chlorine binding site 2 out of 2 in 1dyc

Go back to Chlorine Binding Sites List in 1dyc
Chlorine binding site 2 out of 2 in the Determination of Alpha-Helix Propensity Within the Context of A Folded Protein: Sites 44 and 131 in Bacteriophage T4 Lysozyme


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Determination of Alpha-Helix Propensity Within the Context of A Folded Protein: Sites 44 and 131 in Bacteriophage T4 Lysozyme within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl178

b:15.4
occ:0.50
O A:HOH215 2.9 23.4 1.0
C A:LYS135 3.6 32.0 1.0
CA A:LYS135 3.6 30.3 1.0
N A:SER136 3.7 23.2 1.0
CB A:LYS135 4.0 18.9 1.0
O A:LYS135 4.0 28.8 1.0
OD1 A:ASN140 4.3 30.1 1.0
CA A:SER136 4.5 35.4 1.0
CG A:LYS135 4.7 24.1 1.0
C A:SER136 4.8 23.9 1.0
O A:ALA134 4.8 46.7 1.0
N A:LYS135 4.9 35.8 1.0
O A:SER136 5.0 38.3 1.0

Reference:

M.Blaber, X.J.Zhang, J.D.Lindstrom, S.D.Pepiot, W.A.Baase, B.W.Matthews. Determination of Alpha-Helix Propensity Within the Context of A Folded Protein. Sites 44 and 131 in Bacteriophage T4 Lysozyme. J.Mol.Biol. V. 235 600 1994.
ISSN: ISSN 0022-2836
PubMed: 8289284
DOI: 10.1006/JMBI.1994.1016
Page generated: Thu Jul 10 16:42:43 2025

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