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Chlorine in PDB 1dye: Determination of Alpha-Helix Propensity Within the Context of A Folded Protein: Sites 44 and 131 in Bacteriophage T4 Lysozyme

Enzymatic activity of Determination of Alpha-Helix Propensity Within the Context of A Folded Protein: Sites 44 and 131 in Bacteriophage T4 Lysozyme

All present enzymatic activity of Determination of Alpha-Helix Propensity Within the Context of A Folded Protein: Sites 44 and 131 in Bacteriophage T4 Lysozyme:
3.2.1.17;

Protein crystallography data

The structure of Determination of Alpha-Helix Propensity Within the Context of A Folded Protein: Sites 44 and 131 in Bacteriophage T4 Lysozyme, PDB code: 1dye was solved by X.Zhang, B.W.Matthews, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 6.00 / 1.80
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 61.100, 61.100, 96.500, 90.00, 90.00, 120.00
R / Rfree (%) n/a / n/a

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Determination of Alpha-Helix Propensity Within the Context of A Folded Protein: Sites 44 and 131 in Bacteriophage T4 Lysozyme (pdb code 1dye). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Determination of Alpha-Helix Propensity Within the Context of A Folded Protein: Sites 44 and 131 in Bacteriophage T4 Lysozyme, PDB code: 1dye:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 1dye

Go back to Chlorine Binding Sites List in 1dye
Chlorine binding site 1 out of 2 in the Determination of Alpha-Helix Propensity Within the Context of A Folded Protein: Sites 44 and 131 in Bacteriophage T4 Lysozyme


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Determination of Alpha-Helix Propensity Within the Context of A Folded Protein: Sites 44 and 131 in Bacteriophage T4 Lysozyme within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl173

b:37.9
occ:1.00
O A:HOH209 3.0 30.0 1.0
N A:ARG145 3.3 12.8 1.0
N A:ASN144 3.4 8.8 1.0
C A:THR142 3.4 21.9 1.0
CA A:THR142 3.5 11.1 1.0
O A:THR142 3.6 13.8 1.0
CB A:THR142 3.6 24.6 1.0
CB A:ASN144 3.7 14.5 1.0
CA A:ASN144 3.9 16.4 1.0
N A:PRO143 3.9 17.6 1.0
CB A:ARG145 4.0 17.0 1.0
C A:ASN144 4.1 16.2 1.0
CA A:ARG145 4.2 20.9 1.0
C A:PRO143 4.3 20.0 1.0
CD A:PRO143 4.3 15.2 1.0
CG2 A:THR142 4.4 14.7 1.0
O A:HOH230 4.6 41.8 1.0
CG A:ASN144 4.6 25.7 1.0
CA A:PRO143 4.6 22.9 1.0
ND2 A:ASN144 4.7 21.0 1.0
OG1 A:THR142 4.8 21.4 1.0
O A:HOH237 5.0 43.6 1.0
N A:THR142 5.0 22.2 1.0

Chlorine binding site 2 out of 2 in 1dye

Go back to Chlorine Binding Sites List in 1dye
Chlorine binding site 2 out of 2 in the Determination of Alpha-Helix Propensity Within the Context of A Folded Protein: Sites 44 and 131 in Bacteriophage T4 Lysozyme


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Determination of Alpha-Helix Propensity Within the Context of A Folded Protein: Sites 44 and 131 in Bacteriophage T4 Lysozyme within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl178

b:40.5
occ:0.50
O A:HOH215 3.0 19.0 1.0
C A:LYS135 3.7 23.4 1.0
CA A:LYS135 3.7 21.5 1.0
N A:SER136 3.8 13.9 1.0
CB A:LYS135 4.0 13.5 1.0
O A:LYS135 4.1 23.6 1.0
O A:HOH282 4.2 78.7 1.0
OD1 A:ASN140 4.2 25.8 1.0
CA A:SER136 4.5 14.6 1.0
CG A:LYS135 4.8 24.6 1.0
C A:SER136 4.8 18.4 1.0
O A:SER136 4.9 21.0 1.0
O A:ALA134 5.0 24.9 1.0

Reference:

M.Blaber, X.J.Zhang, J.D.Lindstrom, S.D.Pepiot, W.A.Baase, B.W.Matthews. Determination of Alpha-Helix Propensity Within the Context of A Folded Protein. Sites 44 and 131 in Bacteriophage T4 Lysozyme. J.Mol.Biol. V. 235 600 1994.
ISSN: ISSN 0022-2836
PubMed: 8289284
DOI: 10.1006/JMBI.1994.1016
Page generated: Thu Jul 10 16:42:52 2025

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