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Chlorine in PDB 1eli: Complex of Monomeric Sarcosine Oxidase with the Inhibitor Pyrrole-2- Carboxylate

Enzymatic activity of Complex of Monomeric Sarcosine Oxidase with the Inhibitor Pyrrole-2- Carboxylate

All present enzymatic activity of Complex of Monomeric Sarcosine Oxidase with the Inhibitor Pyrrole-2- Carboxylate:
1.5.3.1;

Protein crystallography data

The structure of Complex of Monomeric Sarcosine Oxidase with the Inhibitor Pyrrole-2- Carboxylate, PDB code: 1eli was solved by M.A.Wagner, P.Trickey, Z.-W.Chen, F.S.Mathews, M.S.Jorns, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 500.00 / 2.00
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 72.825, 69.360, 73.737, 90.00, 94.14, 90.00
R / Rfree (%) 16.3 / 21.3

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Complex of Monomeric Sarcosine Oxidase with the Inhibitor Pyrrole-2- Carboxylate (pdb code 1eli). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Complex of Monomeric Sarcosine Oxidase with the Inhibitor Pyrrole-2- Carboxylate, PDB code: 1eli:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 1eli

Go back to Chlorine Binding Sites List in 1eli
Chlorine binding site 1 out of 2 in the Complex of Monomeric Sarcosine Oxidase with the Inhibitor Pyrrole-2- Carboxylate


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Complex of Monomeric Sarcosine Oxidase with the Inhibitor Pyrrole-2- Carboxylate within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl804

b:20.6
occ:1.00
O3' A:FAD400 3.0 16.2 1.0
O A:HOH832 3.1 16.6 1.0
N A:GLY344 3.1 14.6 1.0
N A:THR318 3.4 23.6 1.0
C3' A:FAD400 3.4 14.9 1.0
N A:SER343 3.6 15.6 1.0
C A:PHE342 3.7 17.4 1.0
CA A:TYR317 3.7 20.1 1.0
O A:HOH889 3.8 20.1 1.0
CB A:PHE342 3.8 18.9 1.0
CA A:GLY344 3.9 18.8 1.0
C A:TYR317 4.0 21.9 1.0
CA A:PHE342 4.1 18.6 1.0
C A:SER343 4.1 16.8 1.0
O A:PHE342 4.1 18.7 1.0
C5' A:FAD400 4.1 13.8 1.0
O A:MSE316 4.2 17.5 1.0
CA A:SER343 4.2 16.8 1.0
C1' A:FAD400 4.3 15.7 1.0
N A:PHE342 4.3 18.0 1.0
O A:THR318 4.4 20.0 1.0
CB A:TYR317 4.4 18.0 1.0
CA A:THR318 4.5 22.5 1.0
C4' A:FAD400 4.5 14.8 1.0
CB A:THR318 4.6 23.3 1.0
C2' A:FAD400 4.6 16.4 1.0
OG A:SER43 4.7 25.2 1.0
C A:GLY344 4.7 17.6 1.0
C A:THR318 4.8 22.9 1.0
N A:HIS345 4.8 16.7 1.0
OG1 A:THR318 4.8 25.5 1.0
N A:TYR317 4.8 19.3 1.0
CB A:SER43 4.9 23.8 1.0
CD1 A:TYR317 4.9 17.9 1.0
C A:MSE316 4.9 20.4 1.0

Chlorine binding site 2 out of 2 in 1eli

Go back to Chlorine Binding Sites List in 1eli
Chlorine binding site 2 out of 2 in the Complex of Monomeric Sarcosine Oxidase with the Inhibitor Pyrrole-2- Carboxylate


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Complex of Monomeric Sarcosine Oxidase with the Inhibitor Pyrrole-2- Carboxylate within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl814

b:20.2
occ:1.00
O B:HOH872 2.8 24.5 1.0
O3' B:FAD400 3.0 20.4 1.0
N B:GLY344 3.2 20.9 1.0
N B:THR318 3.3 22.3 1.0
C3' B:FAD400 3.5 17.6 1.0
CA B:TYR317 3.6 21.3 1.0
N B:SER343 3.7 19.0 1.0
O B:HOH827 3.8 16.7 1.0
C B:PHE342 3.8 19.7 1.0
C B:TYR317 3.9 21.9 1.0
CA B:GLY344 3.9 20.1 1.0
CB B:PHE342 4.0 19.0 1.0
O B:MSE316 4.0 18.8 1.0
C5' B:FAD400 4.1 17.0 1.0
C B:SER343 4.2 20.7 1.0
CA B:PHE342 4.2 19.2 1.0
O B:PHE342 4.2 20.2 1.0
CA B:SER343 4.2 20.0 1.0
CB B:TYR317 4.3 19.8 1.0
O B:THR318 4.3 19.1 1.0
CA B:THR318 4.4 22.2 1.0
C1' B:FAD400 4.4 18.5 1.0
N B:PHE342 4.4 20.1 1.0
CB B:THR318 4.5 20.9 1.0
OG B:SER43 4.5 21.8 1.0
C4' B:FAD400 4.6 18.0 1.0
C2' B:FAD400 4.7 19.8 1.0
C B:THR318 4.7 21.7 1.0
N B:TYR317 4.7 20.8 1.0
OG1 B:THR318 4.7 25.2 1.0
CB B:SER43 4.8 21.2 1.0
C B:MSE316 4.8 20.3 1.0
C B:GLY344 4.8 20.2 1.0
CD1 B:TYR317 4.9 19.0 1.0
N B:HIS345 4.9 21.4 1.0
CG B:TYR317 5.0 21.0 1.0

Reference:

M.A.Wagner, P.Trickey, Z.W.Chen, F.S.Mathews, M.S.Jorns. Monomeric Sarcosine Oxidase: 1. Flavin Reactivity and Active Site Binding Determinants. Biochemistry V. 39 8813 2000.
ISSN: ISSN 0006-2960
PubMed: 10913292
DOI: 10.1021/BI000349Z
Page generated: Thu Jul 10 16:47:56 2025

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