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Chlorine in PDB 1fma: Molybdopterin Synthase (Moad/Moae)

Protein crystallography data

The structure of Molybdopterin Synthase (Moad/Moae), PDB code: 1fma was solved by M.J.Rudolph, M.M.Wuebbens, K.V.Rajagolpalan, H.Schindelin, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 1.58
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 64.150, 47.959, 74.146, 90.00, 107.35, 90.00
R / Rfree (%) 17.2 / 21.8

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Molybdopterin Synthase (Moad/Moae) (pdb code 1fma). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Molybdopterin Synthase (Moad/Moae), PDB code: 1fma:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in 1fma

Go back to Chlorine Binding Sites List in 1fma
Chlorine binding site 1 out of 3 in the Molybdopterin Synthase (Moad/Moae)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Molybdopterin Synthase (Moad/Moae) within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl303

b:28.4
occ:1.00
NE2 D:GLN33 2.7 14.1 1.0
O D:HOH314 2.9 19.0 1.0
CD D:GLN33 3.4 16.7 1.0
CG D:GLN33 3.5 17.8 1.0
CB D:GLN33 3.5 12.4 1.0
O D:HOH336 4.2 31.3 1.0
CA D:GLN33 4.3 12.9 1.0
OE1 D:GLN33 4.4 17.5 1.0
O D:GLN33 4.6 13.5 1.0
O D:HOH358 4.6 30.9 1.0
C D:GLN33 4.7 13.3 1.0
O D:HOH352 4.7 34.8 1.0

Chlorine binding site 2 out of 3 in 1fma

Go back to Chlorine Binding Sites List in 1fma
Chlorine binding site 2 out of 3 in the Molybdopterin Synthase (Moad/Moae)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Molybdopterin Synthase (Moad/Moae) within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Cl301

b:26.9
occ:1.00
NH2 E:ARG39 3.0 35.2 1.0
O E:HOH363 3.2 31.3 1.0
CZ E:ARG39 4.0 27.2 1.0
CE E:LYS119 4.1 37.1 0.5
CE E:LYS119 4.1 35.4 0.5
NH1 E:ARG39 4.3 32.3 1.0
O E:HOH405 4.4 42.1 1.0
CZ E:PHE34 4.5 20.4 1.0
CD E:LYS119 4.7 32.4 0.5
NZ E:LYS119 4.7 45.6 0.5
CD E:LYS119 4.7 33.9 0.5
NZ E:LYS119 4.9 44.2 0.5

Chlorine binding site 3 out of 3 in 1fma

Go back to Chlorine Binding Sites List in 1fma
Chlorine binding site 3 out of 3 in the Molybdopterin Synthase (Moad/Moae)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Molybdopterin Synthase (Moad/Moae) within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Cl302

b:23.4
occ:1.00
O E:HOH308 3.0 21.0 1.0
NH2 E:ARG149 3.3 28.2 1.0
NE2 E:GLN112 3.4 29.6 1.0
CG E:GLN112 3.7 16.6 1.0
CB E:GLN112 4.0 17.8 1.0
CD E:GLN112 4.1 25.9 1.0
CZ E:ARG149 4.4 37.4 1.0
NH1 E:ARG149 4.5 35.2 1.0
OD1 E:ASP116 4.6 16.1 1.0
CA E:GLN112 4.7 15.2 1.0
OD2 E:ASP116 4.8 19.3 1.0

Reference:

M.J.Rudolph, M.M.Wuebbens, K.V.Rajagopalan, H.Schindelin. Crystal Structure of Molybdopterin Synthase and Its Evolutionary Relationship to Ubiquitin Activation. Nat.Struct.Biol. V. 8 42 2001.
ISSN: ISSN 1072-8368
PubMed: 11135669
DOI: 10.1038/83034
Page generated: Thu Jul 10 16:54:16 2025

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