Atomistry » Chlorine » PDB 1kw5-1l62 » 1l36
Atomistry »
  Chlorine »
    PDB 1kw5-1l62 »
      1l36 »

Chlorine in PDB 1l36: Toward A Simplification of the Protein Folding Problem: A Stabilizing Polyalanine Alpha-Helix Engineered in T4 Lysozyme

Enzymatic activity of Toward A Simplification of the Protein Folding Problem: A Stabilizing Polyalanine Alpha-Helix Engineered in T4 Lysozyme

All present enzymatic activity of Toward A Simplification of the Protein Folding Problem: A Stabilizing Polyalanine Alpha-Helix Engineered in T4 Lysozyme:
3.2.1.17;

Protein crystallography data

The structure of Toward A Simplification of the Protein Folding Problem: A Stabilizing Polyalanine Alpha-Helix Engineered in T4 Lysozyme, PDB code: 1l36 was solved by X.-J.Zhang, W.A.Baase, B.W.Matthews, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 6.00 / 1.70
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 61.300, 61.300, 96.300, 90.00, 90.00, 120.00
R / Rfree (%) n/a / n/a

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Toward A Simplification of the Protein Folding Problem: A Stabilizing Polyalanine Alpha-Helix Engineered in T4 Lysozyme (pdb code 1l36). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Toward A Simplification of the Protein Folding Problem: A Stabilizing Polyalanine Alpha-Helix Engineered in T4 Lysozyme, PDB code: 1l36:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in 1l36

Go back to Chlorine Binding Sites List in 1l36
Chlorine binding site 1 out of 3 in the Toward A Simplification of the Protein Folding Problem: A Stabilizing Polyalanine Alpha-Helix Engineered in T4 Lysozyme


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Toward A Simplification of the Protein Folding Problem: A Stabilizing Polyalanine Alpha-Helix Engineered in T4 Lysozyme within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl173

b:42.7
occ:1.00
 O A:HOH933 2.8 28.7 1.0
N A:ARG145 3.3 13.2 1.0
CA A:THR142 3.4 6.7 1.0
C A:THR142 3.5 24.9 1.0
CB A:THR142 3.5 16.6 1.0
N A:ASN144 3.5 10.2 1.0
O A:THR142 3.7 17.6 1.0
CB A:ASN144 3.8 14.3 1.0
CB A:ARG145 3.9 14.6 1.0
CA A:ASN144 3.9 13.5 1.0
N A:PRO143 3.9 20.7 1.0
C A:ASN144 4.1 19.9 1.0
CG2 A:THR142 4.1 16.1 1.0
CA A:ARG145 4.1 17.6 1.0
CD A:PRO143 4.4 11.4 1.0
C A:PRO143 4.4 15.6 1.0
O A:HOH954 4.4 47.4 1.0
O A:HOH961 4.6 44.3 1.0
CA A:PRO143 4.8 11.9 1.0
OG1 A:THR142 4.8 24.9 1.0
CG A:ASN144 4.8 23.5 1.0
N A:THR142 4.9 15.6 1.0

Chlorine binding site 2 out of 3 in 1l36

Go back to Chlorine Binding Sites List in 1l36
Chlorine binding site 2 out of 3 in the Toward A Simplification of the Protein Folding Problem: A Stabilizing Polyalanine Alpha-Helix Engineered in T4 Lysozyme


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Toward A Simplification of the Protein Folding Problem: A Stabilizing Polyalanine Alpha-Helix Engineered in T4 Lysozyme within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl178

b:38.8
occ:0.50
 O A:HOH939 2.8 20.7 1.0
C A:LYS135 3.8 28.5 1.0
O A:LYS135 4.0 30.5 1.0
N A:SER136 4.1 12.8 1.0
CA A:LYS135 4.1 19.0 1.0
OD1 A:ASN140 4.2 24.6 1.0
CB A:LYS135 4.5 15.1 1.0
CA A:SER136 4.7 11.6 1.0
O A:HOH1003 4.7 41.5 1.0
C A:SER136 4.8 20.4 1.0
O A:SER136 4.9 20.8 1.0

Chlorine binding site 3 out of 3 in 1l36

Go back to Chlorine Binding Sites List in 1l36
Chlorine binding site 3 out of 3 in the Toward A Simplification of the Protein Folding Problem: A Stabilizing Polyalanine Alpha-Helix Engineered in T4 Lysozyme


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Toward A Simplification of the Protein Folding Problem: A Stabilizing Polyalanine Alpha-Helix Engineered in T4 Lysozyme within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl197

b:25.7
occ:1.00
 OG A:SER117 3.2 21.2 1.0
N A:SER117 3.2 18.6 1.0
C A:PHE114 3.6 17.8 1.0
N A:ASN116 3.6 18.3 1.0
CA A:PHE114 3.6 25.6 1.0
O A:PHE114 3.8 21.6 1.0
CB A:SER117 3.8 12.6 1.0
CB A:ASN116 3.9 27.9 1.0
N A:THR115 3.9 21.9 1.0
CA A:ASN116 4.0 22.9 1.0
CB A:PHE114 4.1 24.3 1.0
CA A:SER117 4.1 18.4 1.0
C A:ASN116 4.1 25.1 1.0
CD1 A:PHE114 4.4 16.2 1.0
C A:THR115 4.4 22.5 1.0
CB A:ALA132 4.5 17.6 1.0
CG A:PHE114 4.6 23.7 1.0
O A:HOH1031 4.6 43.2 1.0
CA A:THR115 4.7 21.8 1.0
ND2 A:ASN116 4.7 56.9 1.0
O A:HOH1029 4.7 39.6 1.0
O A:GLY113 4.9 28.6 1.0
O A:ALA132 4.9 19.9 1.0
CG A:ASN116 4.9 54.7 1.0
N A:PHE114 5.0 25.3 1.0

Reference:

X.J.Zhang, W.A.Baase, B.W.Matthews. Toward A Simplification of the Protein Folding Problem: A Stabilizing Polyalanine Alpha-Helix Engineered in T4 Lysozyme. Biochemistry V. 30 2012 1991.
ISSN: ISSN 0006-2960
PubMed: 1998663
DOI: 10.1021/BI00222A001
Page generated: Fri Jul 19 23:34:22 2024

Last articles

Zn in 9MJ5
Zn in 9HNW
Zn in 9G0L
Zn in 9FNE
Zn in 9DZN
Zn in 9E0I
Zn in 9D32
Zn in 9DAK
Zn in 8ZXC
Zn in 8ZUF
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy