Atomistry » Chlorine » PDB 1lwk-1mj5 » 1lzr
Atomistry »
  Chlorine »
    PDB 1lwk-1mj5 »
      1lzr »

Chlorine in PDB 1lzr: Structural Changes of the Active Site Cleft and Different Saccharide Binding Modes in Human Lysozyme Co-Crystallized with Hexa-N-Acetyl- Chitohexaose at pH 4.0

Enzymatic activity of Structural Changes of the Active Site Cleft and Different Saccharide Binding Modes in Human Lysozyme Co-Crystallized with Hexa-N-Acetyl- Chitohexaose at pH 4.0

All present enzymatic activity of Structural Changes of the Active Site Cleft and Different Saccharide Binding Modes in Human Lysozyme Co-Crystallized with Hexa-N-Acetyl- Chitohexaose at pH 4.0:
3.2.1.17;

Protein crystallography data

The structure of Structural Changes of the Active Site Cleft and Different Saccharide Binding Modes in Human Lysozyme Co-Crystallized with Hexa-N-Acetyl- Chitohexaose at pH 4.0, PDB code: 1lzr was solved by M.Matsushima, K.Inaka, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 5.00 / 1.50
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 56.510, 60.910, 34.010, 90.00, 90.00, 90.00
R / Rfree (%) n/a / n/a

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structural Changes of the Active Site Cleft and Different Saccharide Binding Modes in Human Lysozyme Co-Crystallized with Hexa-N-Acetyl- Chitohexaose at pH 4.0 (pdb code 1lzr). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Structural Changes of the Active Site Cleft and Different Saccharide Binding Modes in Human Lysozyme Co-Crystallized with Hexa-N-Acetyl- Chitohexaose at pH 4.0, PDB code: 1lzr:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 1lzr

Go back to Chlorine Binding Sites List in 1lzr
Chlorine binding site 1 out of 2 in the Structural Changes of the Active Site Cleft and Different Saccharide Binding Modes in Human Lysozyme Co-Crystallized with Hexa-N-Acetyl- Chitohexaose at pH 4.0


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structural Changes of the Active Site Cleft and Different Saccharide Binding Modes in Human Lysozyme Co-Crystallized with Hexa-N-Acetyl- Chitohexaose at pH 4.0 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl131

b:13.2
occ:0.91
 O A:HOH270 3.1 26.9 1.0
N A:SER80 3.2 8.3 1.0
O A:HOH282 3.3 17.0 0.9
CB A:SER80 3.8 9.6 1.0
CA A:LEU79 3.9 11.7 1.0
CB A:ALA83 4.0 7.8 1.0
CD2 A:LEU79 4.0 14.8 1.0
C A:LEU79 4.1 9.8 1.0
CA A:SER80 4.1 8.7 1.0
CB A:LEU79 4.4 12.4 1.0
O A:SER80 4.4 8.8 1.0
C A:SER80 4.8 9.0 1.0
CG A:LEU79 4.9 15.2 1.0
O A:HIS78 5.0 13.0 1.0
O A:HOH263 5.0 55.7 0.8
OG A:SER80 5.0 12.2 1.0

Chlorine binding site 2 out of 2 in 1lzr

Go back to Chlorine Binding Sites List in 1lzr
Chlorine binding site 2 out of 2 in the Structural Changes of the Active Site Cleft and Different Saccharide Binding Modes in Human Lysozyme Co-Crystallized with Hexa-N-Acetyl- Chitohexaose at pH 4.0


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Structural Changes of the Active Site Cleft and Different Saccharide Binding Modes in Human Lysozyme Co-Crystallized with Hexa-N-Acetyl- Chitohexaose at pH 4.0 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl132

b:10.8
occ:0.79
 O A:HOH285 3.2 16.3 1.0
ND2 A:ASN66 3.3 11.8 1.0
CA A:SER80 3.7 8.7 1.0
CB A:ASN66 3.8 9.0 1.0
CB A:SER80 3.9 9.6 1.0
O A:HOH298 4.0 34.1 0.9
N A:SER80 4.1 8.3 1.0
CG A:ASN66 4.1 9.7 1.0
O A:ASN66 4.2 7.7 1.0
O A:HOH282 4.4 17.0 0.9
C A:LEU79 4.5 9.8 1.0
OG A:SER80 4.6 12.2 1.0
O A:LEU79 4.6 10.6 1.0
ND2 A:ASN75 4.8 13.8 1.0
C A:ASN66 4.8 7.5 1.0
CA A:ASN66 4.8 8.8 1.0
O A:HOH301 4.9 52.5 1.0

Reference:

H.Song, K.Inaka, K.Maenaka, M.Matsushima. Structural Changes of Active Site Cleft and Different Saccharide Binding Modes in Human Lysozyme Co-Crystallized with Hexa-N-Acetyl-Chitohexaose at pH 4.0. J.Mol.Biol. V. 244 522 1994.
ISSN: ISSN 0022-2836
PubMed: 7990138
DOI: 10.1006/JMBI.1994.1750
Page generated: Sat Jul 20 00:00:00 2024

Last articles

Zn in 9MJ5
Zn in 9HNW
Zn in 9G0L
Zn in 9FNE
Zn in 9DZN
Zn in 9E0I
Zn in 9D32
Zn in 9DAK
Zn in 8ZXC
Zn in 8ZUF
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy